RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 TMEM260Q9NX78 707 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
CXCL12-207ENST00000488591 STK36Q9NRP7 1315 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 A6NJR5 290 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 SPATA31C2B4DYI2 1134 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 ST18O60284 1047 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 MYL3P08590 195 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 NEDD9Q14511 834 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 SNX17Q15036 470 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 EMID1Q96A84 441 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-207ENST00000488591 SEZ6LQ9BYH1 1024 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 BACH2Q9BYV9 841 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 MLXIPQ9HAP2 919 aa17.21■□□□□ 0.35
CXCL12-207ENST00000488591 ORC3Q9UBD5 711 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-207ENST00000488591 ALPK3Q96L96 1907 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-207ENST00000488591 H0YGN5 161 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 MAFGO15525 162 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 LARGE1O95461 756 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 GGPS1O95749 300 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 ZNF76P36508 570 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 TRIM60Q495X7 471 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
CXCL12-207ENST00000488591 GALNT17Q6IS24 598 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 GIMAP8Q8ND71 665 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-207ENST00000488591 AFG1LQ8WV93 481 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 GPRASP2Q96D09 838 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 PGBD1Q96JS3 809 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 MTG1Q9BT17 334 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-207ENST00000488591 SH2B1Q9NRF2 756 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-207ENST00000488591 PRKAG2Q9UGJ0 569 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 MKI67P46013 3256 aaKnown RBP17.2■□□□□ 0.34
CXCL12-207ENST00000488591 MROH7Q68CQ1 1323 aa17.2■□□□□ 0.34
CXCL12-207ENST00000488591 DCDC2CA8MYV0 355 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 CTDNEP1O95476 244 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 UBA1P22314 1058 aaKnown RBP17.19■□□□□ 0.34
CXCL12-207ENST00000488591 SREBF1P36956 1147 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 DGKDQ16760 1214 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 MYSM1Q5VVJ2 828 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 PPTC7Q8NI37 304 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 SPATA33Q96N06 139 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 PCDHA4Q9UN74 947 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 UBIAD1Q9Y5Z9 338 aa17.19■□□□□ 0.34
CXCL12-207ENST00000488591 MYH7BA7E2Y1 1941 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 ARVCFO00192 962 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 PQBP1O60828 265 aaKnown RBP17.18■□□□□ 0.34
CXCL12-207ENST00000488591 MMP3P08254 477 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 ITGB5P18084 799 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 ARHGAP4P98171 946 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 PURAQ00577 322 aaKnown RBP17.18■□□□□ 0.34
CXCL12-207ENST00000488591 SP2Q02086 613 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 TLE2Q04725 743 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 MTMR1Q13613 665 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 ITGA7Q13683 1181 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 BLIDQ8IZY5 108 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 TOX2Q96NM4 488 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 SENP7Q9BQF6 1050 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 MXRA8Q9BRK3 442 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 JADE2Q9NQC1 790 aa17.18■□□□□ 0.34
CXCL12-207ENST00000488591 NOP56O00567 594 aaKnown RBP17.17■□□□□ 0.34
CXCL12-207ENST00000488591 TLR3O15455 904 aaKnown RBP17.17■□□□□ 0.34
CXCL12-207ENST00000488591 PPFIA4O75335 1185 aa17.17■□□□□ 0.34
CXCL12-207ENST00000488591 CDK7P50613 346 aa17.17■□□□□ 0.34
CXCL12-207ENST00000488591 CEP55Q53EZ4 464 aa17.17■□□□□ 0.34
CXCL12-207ENST00000488591 ANKRD33Q7Z3H0 272 aa17.17■□□□□ 0.34
CXCL12-207ENST00000488591 CCDC83Q8IWF9 413 aa17.17■□□□□ 0.34
CXCL12-207ENST00000488591 DAGLBQ8NCG7 672 aa17.17■□□□□ 0.34
CXCL12-207ENST00000488591 NSUN7Q8NE18 718 aaKnown RBP17.17■□□□□ 0.34
CXCL12-207ENST00000488591 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
CXCL12-207ENST00000488591 ALG1Q9BT22 464 aa17.17■□□□□ 0.34
CXCL12-207ENST00000488591 ZMYND8Q9ULU4 1186 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-207ENST00000488591 SORBS3O60504 671 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 CYP3A4P08684 503 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 SYN1P17600 705 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 MCM2P49736 904 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 PSMC6P62333 389 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
CXCL12-207ENST00000488591 SEMA3FQ13275 785 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 TRIM29Q14134 588 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 METTL7BQ6UX53 244 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 RASGRP4Q8TDF6 673 aa17.16■□□□□ 0.34
CXCL12-207ENST00000488591 PRDM5Q9NQX1 630 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-207ENST00000488591 CLTBP09497 229 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 FDPSP14324 419 aaKnown RBP17.15■□□□□ 0.34
CXCL12-207ENST00000488591 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 HSDL1Q3SXM5 330 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 NIPA1Q7RTP0 329 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 SLC43A3Q8NBI5 491 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 PHF20Q9BVI0 1012 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 KATNAL1Q9BW62 490 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 KCNH7Q9NS40 1196 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
CXCL12-207ENST00000488591 MEIS1O00470 390 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 DTNBO60941 627 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 USP11P51784 963 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms