RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 POLR2MP0CAP2 368 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 UBA7P41226 1012 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 NLRP12P59046 1061 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 ARHGAP4P98171 946 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 PNOCQ13519 176 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 E2F4Q16254 413 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 SAMD3Q8N6K7 520 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 IGSF22Q8N9C0 903 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 ERCC4Q92889 916 aaPredicted RBP14.33□□□□□ -0.11
NELFE-209ENST00000488426 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 EHMT1Q9H9B1 1298 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 CBX8Q9HC52 389 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 BTBD7Q9P203 1132 aa14.33□□□□□ -0.11
NELFE-209ENST00000488426 ZBED4O75132 1171 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 CCL5P13501 91 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 ERVK-9P63128 1117 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 ERVK-24P63145 666 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 GHRHRQ02643 423 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
NELFE-209ENST00000488426 GPRC5AQ8NFJ5 357 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 DISC1Q9NRI5 854 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 CCDC39Q9UFE4 941 aa14.33□□□□□ -0.12
NELFE-209ENST00000488426 PLXNB2O15031 1838 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 CFBP00751 764 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 CYP3A4P08684 503 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
NELFE-209ENST00000488426 CIITAP33076 1130 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 PDIA5Q14554 519 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 C11orf57Q6ZUT1 292 aaPredicted RBP14.32□□□□□ -0.12
NELFE-209ENST00000488426 MCF2L2Q86YR7 1114 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 TRIML1Q8N9V2 468 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 CUEDC2Q9H467 287 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 CTDP1Q9Y5B0 961 aaPredicted RBP14.32□□□□□ -0.12
NELFE-209ENST00000488426 PCDHA5Q9Y5H7 936 aa14.32□□□□□ -0.12
NELFE-209ENST00000488426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.31□□□□□ -0.12
NELFE-209ENST00000488426 SPDYE16A6NNV3 312 aaPredicted RBP14.31□□□□□ -0.12
NELFE-209ENST00000488426 SMC2O95347 1197 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
NELFE-209ENST00000488426 TECP42680 631 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 TXKP42681 527 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 SARSP49591 514 aaKnown RBP14.31□□□□□ -0.12
NELFE-209ENST00000488426 HSD17B4P51659 736 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 IRF5Q13568 498 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 Q4G0T1 1027 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 PDXDC2PQ6P474 469 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 PAGE5Q96GU1 130 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 AGBL1Q96MI9 1066 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 PPP1R9BQ96SB3 815 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 BPIFA3Q9BQP9 254 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 MAGEF1Q9HAY2 307 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 KCNMB3Q9NPA1 279 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 MAP3K20Q9NYL2 800 aaKnown RBP14.31□□□□□ -0.12
NELFE-209ENST00000488426 CEP290O15078 2479 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
NELFE-209ENST00000488426 VWA5AO00534 786 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 TBX3O15119 743 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 INHAP05111 366 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 CYP2B6P20813 491 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 STAT6P42226 847 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 OAZ1P54368 228 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
NELFE-209ENST00000488426 DPCR1Q3MIW9 517 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 RRAGBQ5VZM2 374 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 CABP7Q86V35 215 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 SLFN12Q8IYM2 578 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 RABGAP1Q9Y3P9 1069 aa14.31□□□□□ -0.12
NELFE-209ENST00000488426 RANBP2P49792 3224 aaKnown RBP14.3□□□□□ -0.12
NELFE-209ENST00000488426 PP2D1A8MPX8 630 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 BIN1O00499 593 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 DSG3P32926 999 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 COG2Q14746 738 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 IQCB1Q15051 598 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 LUZP1Q86V48 1076 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 SLAIN1Q8ND83 568 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 RASSF8Q8NHQ8 419 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 PXYLP1Q8TE99 480 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 CLEC4DQ8WXI8 215 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 HAS1Q92839 578 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 TTC12Q9H892 705 aaPredicted RBP14.3□□□□□ -0.12
NELFE-209ENST00000488426 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
NELFE-209ENST00000488426 SLC26A4O43511 780 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 MARCH6O60337 910 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 MYL1P05976 194 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 CDC25AP30304 524 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 CCL14Q16627 93 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 GPR142Q7Z601 462 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 CPXCR1Q8N123 301 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 TRIB2Q92519 343 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 ATG4CQ96DT6 458 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 PDLIM2Q96JY6 352 aa14.29□□□□□ -0.12
NELFE-209ENST00000488426 GSDMAQ96QA5 445 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms