RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 PDE11AQ9HCR9 933 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 POLR3EQ9NVU0 708 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 VPS18Q9P253 973 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 TUBE1Q9UJT0 475 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 ZNF536O15090 1300 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 A0A0G2JLL6 359 aaPredicted RBP15.32■□□□□ 0.04
COPS7B-221ENST00000488111 SERPINC1P01008 464 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 MARCKSP29966 332 aaPredicted RBP15.32■□□□□ 0.04
COPS7B-221ENST00000488111 MYL5Q02045 173 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 GOLGA8FQ08AF8 430 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 GOLGA8DPQ0D2H9 430 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 ZNF174Q15697 407 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 HDXQ7Z353 690 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 PRRT2Q7Z6L0 340 aaPredicted RBP15.32■□□□□ 0.04
COPS7B-221ENST00000488111 TBC1D5Q92609 795 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 SLC38A10Q9HBR0 1119 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 RAB21Q9UL25 225 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 JRKLQ9Y4A0 524 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
COPS7B-221ENST00000488111 VWA5AO00534 786 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 CXCL11O14625 94 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 OPLAHO14841 1288 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
COPS7B-221ENST00000488111 COG2Q14746 738 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 CCPG1Q9ULG6 757 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 KCNH4Q9UQ05 1017 aa15.32■□□□□ 0.04
COPS7B-221ENST00000488111 EIF3CLB5ME19 914 aaKnown RBP15.31■□□□□ 0.04
COPS7B-221ENST00000488111 POTEB2H3BUK9 544 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 PEX10O60683 326 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 DSG3P32926 999 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 EIF3CQ99613 913 aaKnown RBP15.31■□□□□ 0.04
COPS7B-221ENST00000488111 BAG1Q99933 345 aaPredicted RBP15.31■□□□□ 0.04
COPS7B-221ENST00000488111 ANKZF1Q9H8Y5 726 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 SPTLC2O15270 562 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 STX10O60499 249 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 ZBED4O75132 1171 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 HOXA13P31271 388 aaPredicted RBP15.31■□□□□ 0.04
COPS7B-221ENST00000488111 CORO7P57737 925 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 FKBP1BP68106 108 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 PTPAQ15257 358 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 FOXR1Q6PIV2 292 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 SRGAP1Q7Z6B7 1085 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 MSANTD4Q8NCY6 345 aa15.31■□□□□ 0.04
COPS7B-221ENST00000488111 MEIS2O14770 477 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 KIF3CO14782 793 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
COPS7B-221ENST00000488111 ICAM1P05362 532 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 ALAS1P13196 640 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 CMA1P23946 247 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 AXDND1Q5T1B0 1012 aaPredicted RBP15.3■□□□□ 0.04
COPS7B-221ENST00000488111 TOGARAM2Q6ZUX3 1019 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 KRT25Q7Z3Z0 450 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 TBCKQ8TEA7 893 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 P2RX7Q99572 595 aaKnown RBP15.3■□□□□ 0.04
COPS7B-221ENST00000488111 INTS13Q9NVM9 706 aa15.3■□□□□ 0.04
COPS7B-221ENST00000488111 CUTAO60888 179 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 CFBP00751 764 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 PFKFB1P16118 471 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 MCM7P33993 719 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 CLK2P49760 499 aaKnown RBP15.29■□□□□ 0.04
COPS7B-221ENST00000488111 HUNKP57058 714 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 NONOQ15233 471 aaKnown RBP eCLIP15.29■□□□□ 0.04
COPS7B-221ENST00000488111 NCAPGQ9BPX3 1015 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 L1RE1Q9UN81 338 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
COPS7B-221ENST00000488111 CPP00450 1065 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 MOGSQ13724 837 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 LETM2Q2VYF4 491 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 PROCA1Q8NCQ7 364 aaPredicted RBP15.29■□□□□ 0.04
COPS7B-221ENST00000488111 PPM1EQ8WY54 764 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.29■□□□□ 0.04
COPS7B-221ENST00000488111 HOXC10Q9NYD6 342 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 RIPK3Q9Y572 518 aa15.29■□□□□ 0.04
COPS7B-221ENST00000488111 SNAPC2Q13487 334 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 PLS1Q14651 629 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 TMEM132BQ14DG7 1078 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
COPS7B-221ENST00000488111 NFIBO00712 420 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 ERLIN1O75477 346 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 MCM6Q14566 821 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 POTEEQ6S8J3 1075 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 TC2NQ8N9U0 490 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 CLIC6Q96NY7 704 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 MYCBPQ99417 103 aaPredicted RBP15.28■□□□□ 0.04
COPS7B-221ENST00000488111 ADAMTS5Q9UNA0 930 aa15.28■□□□□ 0.04
COPS7B-221ENST00000488111 UNCXA6NJT0 531 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 TUBB4BP68371 445 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 TRAF1Q13077 416 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 LRRC31Q6UY01 552 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 CEP112Q8N8E3 955 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 REPS2Q8NFH8 660 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 FAM71BQ8TC56 605 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 AGTPBP1Q9UPW5 1226 aa15.27■□□□□ 0.04
COPS7B-221ENST00000488111 ABCB11O95342 1321 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms