RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 GAS8O95995 478 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SARSP49591 514 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CDC37Q16543 378 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ARMCX3Q9UH62 379 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CALUO43852 315 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PDHA1P08559 390 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FAM133AQ8N9E0 248 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 DDX47Q9H0S4 455 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 GGA2Q9UJY4 613 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 NEDD4P46934 1319 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PPRC1Q5VV67 1664 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PASKQ96RG2 1323 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 GUCY1A2P33402 732 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 HERVK_113P62684 666 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 DR1Q01658 176 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 KCNB1Q14721 858 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TRPM8Q7Z2W7 1104 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 STRBPQ96SI9 672 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CD163L1Q9NR16 1453 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PFDN1O60925 122 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PRPF6O94906 941 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ANP32DO95626 131 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ATP2C1P98194 919 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 LRRC63Q05C16 580 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TCIRG1Q13488 830 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FAM26FQ5R3K3 315 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PPP1R14CQ8TAE6 165 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 MTA3Q9BTC8 594 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 EDEM3Q9BZQ6 932 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SLITRK6Q9H5Y7 841 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 H7C1W4 665 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SHOX2O60902 331 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FBXL16Q8N461 479 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TEX9Q8N6V9 391 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 A0A0U1RQJ8 604 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FAM237AA0A1B0GTK4 181 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CREB3O43889 395 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 LMNAP02545 664 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 HSPA6P17066 643 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TRAF1Q13077 416 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 OR2W6PQ8NHA6 318 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CEP63Q96MT8 703 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 UTYO14607 1347 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ATXN2Q99700 1313 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 THAP12O43422 761 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 LDHCP07864 332 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PHKA1P46020 1223 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 GSCP56915 257 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 COL9A3Q14050 684 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 HAUS3Q68CZ6 603 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ZBTB10Q96DT7 871 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 KDM4CQ9H3R0 1056 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 USP31Q70CQ4 1352 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ANKRD20A8PQ5CZ79 823 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PPP1R21Q6ZMI0 780 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CEP72Q9P209 647 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 STOML1Q9UBI4 398 aa16.65■□□□□ 0.26
HLA-DQB1-209ENST00000487676 NCAPD2Q15021 1401 aa16.64■□□□□ 0.26
HLA-DQB1-209ENST00000487676 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PDS5AQ29RF7 1337 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PLCG1P19174 1290 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 KAT2BQ92831 832 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SPZ1Q9BXG8 430 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ETNK1Q9HBU6 452 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SLC1A4P43007 532 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 STRN3Q13033 797 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ALKBH5Q6P6C2 394 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ISCUQ9H1K1 167 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 TMBIM4Q9HC24 238 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 MROH5Q6ZUA9 1318 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ZCCHC11Q5TAX3 1644 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 DAPK3O43293 454 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PCP11498 1178 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SEPT14Q6ZU15 432 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 LRRC8CQ8TDW0 803 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PCDHA4Q9UN74 947 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 TRPC6Q9Y210 931 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 DUSP10Q9Y6W6 482 aa16.64■□□□□ 0.25
HLA-DQB1-209ENST00000487676 HECW2Q9P2P5 1572 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SSU72P8A0A1W2PR75 194 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 EIF4E1BA6NMX2 242 aaKnown RBP16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 GSTA1P08263 222 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 RAD23BP54727 409 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 AMPD2Q01433 879 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 RNASELQ05823 741 aaKnown RBP16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ADAM9Q13443 819 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 EXOC3L4Q17RC7 722 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ANKRD35Q8N283 1001 aa16.63■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SDR42E1Q8WUS8 393 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms