RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ANKRD2Q9GZV1 360 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 DEFB129Q9H1M3 183 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 GREM2Q9H772 168 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 CBX8Q9HC52 389 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 ADGRE2Q9UHX3 823 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 LAS1LQ9Y4W2 734 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 ZNF804BA4D1E1 1349 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 SSC5DA1L4H1 1573 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 PI4KAP2A4QPH2 592 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 SASH1O94885 1247 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 CASP7P55210 303 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 FGD1P98174 961 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 TAGLNQ01995 201 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 MAP7Q14244 749 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 WDR43Q15061 677 aaKnown RBP eCLIP6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 CPSF6Q16630 551 aaKnown RBP eCLIP6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 HABP4Q5JVS0 413 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 PI4KAP1Q8N8J0 262 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 C8orf58Q8NAV2 365 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 GATA6Q92908 595 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 MXD3Q9BW11 206 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 CD209Q9NNX6 404 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 PARP2Q9UGN5 583 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 SCAF8Q9UPN6 1271 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 PTPN22Q9Y2R2 807 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 MAP3K2Q9Y2U5 619 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 ECM29Q5VYK3 1845 aa6.5□□□□□ -1.37
R3HDM1-218ENST00000487294 IGF2BP3O00425 579 aaKnown RBP eCLIP6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 DYNC1LI2O43237 492 aaPredicted RBP6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 IL1R1P14778 569 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 IGHMBP2P38935 993 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 DAB2P98082 770 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 NEXNQ0ZGT2 675 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 SUPT20HL1Q3ZLR7 823 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 ZC3H12AQ5D1E8 599 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 OTUD7BQ6GQQ9 843 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 ZAR1Q86SH2 424 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 KIAA0825Q8IV33 1275 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 CERS5Q8N5B7 392 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 ERO1AQ96HE7 468 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 WNK4Q96J92 1243 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 TBC1D32Q96NH3 1257 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 ATXN3LQ9H3M9 355 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 C1GALT1Q9NS00 363 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 ANGEL1Q9UNK9 670 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 TTF2Q9UNY4 1162 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 DAGLAQ9Y4D2 1042 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 SAMM50Q9Y512 469 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 TRIM17Q9Y577 477 aa6.49□□□□□ -1.37
R3HDM1-218ENST00000487294 CEP290O15078 2479 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 APAF1O14727 1248 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 KLRK1P26718 216 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 GCKRQ14397 625 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 TTLL4Q14679 1199 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 DLGAP5Q15398 846 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 PCNX4Q63HM2 1172 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 ANKRD13AQ8IZ07 590 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 TSPYL6Q8N831 410 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 FAM161BQ96MY7 647 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 PTPN18Q99952 460 aa6.48□□□□□ -1.37
R3HDM1-218ENST00000487294 FAM170BA6NMN3 283 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 ELL2O00472 640 aaPredicted RBP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 MYO1BO43795 1136 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 USP2O75604 605 aaPredicted RBP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 FXR1P51114 621 aaKnown RBP eCLIP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 HNRNPUQ00839 825 aaKnown RBP eCLIP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 SP3Q02447 781 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 CHRNDQ07001 517 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 CRHR2Q13324 411 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 TNFAIP1Q13829 316 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 LRRC14Q15048 493 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 ARHGEF6Q15052 776 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 CWF19L2Q2TBE0 894 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 LLGL2Q6P1M3 1020 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 SV2BQ7L1I2 683 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 UBE3BQ7Z3V4 1068 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 LINS1Q8NG48 757 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 ZNF333Q96JL9 665 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 CLMNQ96JQ2 1002 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 PRMT6Q96LA8 375 aaPredicted RBP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 MPHOSPH8Q99549 860 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 PIDD1Q9HB75 910 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 ZCCHC17Q9NP64 241 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 CYP8B1Q9UNU6 501 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 CACNA1FO60840 1977 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 RANBP2P49792 3224 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 FAM205AQ6ZU69 1335 aa6.47□□□□□ -1.37
R3HDM1-218ENST00000487294 SPEF2Q9C093 1822 aa6.46□□□□□ -1.37
R3HDM1-218ENST00000487294 ERCC3P19447 782 aa6.46□□□□□ -1.38
R3HDM1-218ENST00000487294 ERVK-24P63145 666 aa6.46□□□□□ -1.38
R3HDM1-218ENST00000487294 CAP1Q01518 475 aa6.46□□□□□ -1.38
R3HDM1-218ENST00000487294 PSMD2Q13200 908 aa6.46□□□□□ -1.38
R3HDM1-218ENST00000487294 FZD5Q13467 585 aa6.46□□□□□ -1.38
R3HDM1-218ENST00000487294 RASA3Q14644 834 aa6.46□□□□□ -1.38
R3HDM1-218ENST00000487294 NBPF12Q5TAG4 269 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-218ENST00000487294 MEI1Q5TIA1 1274 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms