RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 STAT2P52630 851 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 BAATQ14032 418 aaPredicted RBP13.93□□□□□ -0.18
TRIM56-204ENST00000487252 TTF1Q15361 905 aaPredicted RBP13.93□□□□□ -0.18
TRIM56-204ENST00000487252 RSPO4Q2I0M5 234 aaPredicted RBP13.93□□□□□ -0.18
TRIM56-204ENST00000487252 CWF19L1Q69YN2 538 aaKnown RBP13.93□□□□□ -0.18
TRIM56-204ENST00000487252 CCDC62Q6P9F0 684 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 AFG1LQ8WV93 481 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 S1PR5Q9H228 398 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 FANCMQ8IYD8 2048 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 SETXQ7Z333 2677 aaKnown RBP13.93□□□□□ -0.18
TRIM56-204ENST00000487252 GPR179Q6PRD1 2367 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 ADGRA3Q8IWK6 1321 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 E9PSI1 815 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 GNAI2P04899 355 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
TRIM56-204ENST00000487252 NRIP1P48552 1158 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIM56-204ENST00000487252 HIC1Q14526 733 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 NAALADL2Q58DX5 795 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 NSMFQ6X4W1 530 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 ZBTB33Q86T24 672 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 FAM160B2Q86V87 743 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 C7orf31Q8N865 590 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 SPPL3Q8TCT6 385 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 CHURC1Q8WUH1 139 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 SEPT8Q92599 483 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 ZNF689Q96CS4 500 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-204ENST00000487252 HAUS7Q99871 368 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 OSBPL7Q9BZF2 842 aa13.92□□□□□ -0.18
TRIM56-204ENST00000487252 F2P00734 622 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 ARP10275 920 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 AOC1P19801 751 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 ZNF200P98182 395 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-204ENST00000487252 ARHGAP1Q07960 439 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 VN1R2Q8NFZ6 395 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 SSH3Q8TE77 659 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 MTMR4Q9NYA4 1195 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
TRIM56-204ENST00000487252 KIAA1671Q9BY89 1806 aa13.91□□□□□ -0.18
TRIM56-204ENST00000487252 PI15O43692 258 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 MBD4O95243 580 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 ITGB1P05556 798 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 CASTP20810 708 aaKnown RBP13.9□□□□□ -0.18
TRIM56-204ENST00000487252 PSEN2P49810 448 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 PDE4BQ07343 736 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 KCNC3Q14003 757 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 SLFN13Q68D06 897 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 RUBCNQ92622 972 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 CEP95Q96GE4 821 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 GMCL1Q96IK5 515 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 SMOC2Q9H3U7 446 aa13.9□□□□□ -0.18
TRIM56-204ENST00000487252 CSPG5O95196 566 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 ICAM1P05362 532 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 ADRB1P08588 477 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 NPR3P17342 541 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 THPOP40225 353 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 ATXN1P54253 815 aaKnown RBP13.89□□□□□ -0.19
TRIM56-204ENST00000487252 RBM10P98175 930 aaKnown RBP13.89□□□□□ -0.19
TRIM56-204ENST00000487252 KIAA0319Q5VV43 1072 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 DTWD2Q8NBA8 298 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 CYP2W1Q8TAV3 490 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 APBB2Q92870 758 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 KATNAL1Q9BW62 490 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 TTC3P53804 2025 aa13.89□□□□□ -0.19
TRIM56-204ENST00000487252 NFIBO00712 420 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 SURF6O75683 361 aaKnown RBP13.88□□□□□ -0.19
TRIM56-204ENST00000487252 TTLL1O95922 423 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 HOXD8P13378 290 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-204ENST00000487252 HOXB3P14651 431 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-204ENST00000487252 HOXC8P31273 242 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 PDE4DQ08499 809 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-204ENST00000487252 MFSD10Q14728 455 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 DGKDQ16760 1214 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 KIAA0753Q2KHM9 967 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 RBM23Q86U06 439 aaKnown RBP13.88□□□□□ -0.19
TRIM56-204ENST00000487252 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 ARPP21Q9UBL0 812 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-204ENST00000487252 CCPG1Q9ULG6 757 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 PRR12Q9ULL5 1215 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 PLXNA4Q9HCM2 1894 aa13.88□□□□□ -0.19
TRIM56-204ENST00000487252 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 CAND2O75155 1236 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 GH1P01241 217 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 SDHBP21912 280 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 ADD2P35612 726 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 SNAP25P60880 206 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 SYCE2Q6PIF2 218 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 SLC30A10Q6XR72 485 aa13.87□□□□□ -0.19
TRIM56-204ENST00000487252 DNERQ8NFT8 737 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms