RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.53
LBR-207ENST00000487054 DOCK5Q9H7D0 1870 aa11.71□□□□□ -0.53
LBR-207ENST00000487054 TET1Q8NFU7 2136 aa11.71□□□□□ -0.54
LBR-207ENST00000487054 PTPRSQ13332 1948 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 FOSL2P15408 326 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
LBR-207ENST00000487054 FGD1P98174 961 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 ARHGAP1Q07960 439 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 GRM4Q14833 912 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 PSRC1Q6PGN9 363 aaPredicted RBP11.7□□□□□ -0.54
LBR-207ENST00000487054 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
LBR-207ENST00000487054 ZNF654Q8IZM8 581 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 MAFAQ8NHW3 353 aaPredicted RBP11.7□□□□□ -0.54
LBR-207ENST00000487054 IL31RAQ8NI17 732 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 CTCFLQ8NI51 663 aaPredicted RBP11.7□□□□□ -0.54
LBR-207ENST00000487054 AFG1LQ8WV93 481 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 PIBF1Q8WXW3 757 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 TIFAQ96CG3 184 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 MTMR8Q96EF0 704 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 PXMP2Q9NR77 195 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 MRPL11Q9Y3B7 192 aaKnown RBP11.7□□□□□ -0.54
LBR-207ENST00000487054 SLC12A7Q9Y666 1083 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 TRANK1O15050 2925 aa11.7□□□□□ -0.54
LBR-207ENST00000487054 NID2Q14112 1375 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 ZBTB5O15062 677 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 NKRFO15226 690 aaKnown RBP eCLIP11.69□□□□□ -0.54
LBR-207ENST00000487054 RGS20O76081 388 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 FGBP02675 491 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 MMP3P08254 477 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 RBM25P49756 843 aaKnown RBP11.69□□□□□ -0.54
LBR-207ENST00000487054 HSD17B4P51659 736 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 RABGGTBP53611 331 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 EVCP57679 992 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 TTLL4Q14679 1199 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 ANKRD1Q15327 319 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 ARHGEF16Q5VV41 709 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 NFXL1Q6ZNB6 911 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 DEFB128Q7Z7B8 93 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 MCF2L2Q86YR7 1114 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 USP38Q8NB14 1042 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 NSUN6Q8TEA1 469 aaKnown RBP11.69□□□□□ -0.54
LBR-207ENST00000487054 HERVK_113Q902F9 699 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 KAT2BQ92831 832 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
LBR-207ENST00000487054 CTAGE1Q96RT6 745 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 MPHOSPH6Q99547 160 aaKnown RBP11.69□□□□□ -0.54
LBR-207ENST00000487054 MYL10Q9BUA6 226 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 AMNQ9BXJ7 453 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 ZNF576Q9H609 170 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 RBM28Q9NW13 759 aaKnown RBP11.69□□□□□ -0.54
LBR-207ENST00000487054 YBX2Q9Y2T7 364 aaKnown RBP11.69□□□□□ -0.54
LBR-207ENST00000487054 PCDHA1Q9Y5I3 950 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 MYO9BQ13459 2157 aa11.69□□□□□ -0.54
LBR-207ENST00000487054 CCDC196A0A1B0GTZ2 297 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 NR3C2P08235 984 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 MYCLP12524 364 aaPredicted RBP11.68□□□□□ -0.54
LBR-207ENST00000487054 MYOGP15173 224 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 STXBP2Q15833 593 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 APOA5Q6Q788 366 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 NKX2-4Q9H2Z4 354 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 BCAS3Q9H6U6 928 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
LBR-207ENST00000487054 DDX41Q9UJV9 622 aaKnown RBP11.68□□□□□ -0.54
LBR-207ENST00000487054 TMEM265A0A087WTH1 108 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 ZBTB43O43298 467 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 SEC24BO95487 1268 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 GH1P01241 217 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 GHRHRQ02643 423 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 PGM5Q15124 567 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
LBR-207ENST00000487054 Q6ZUG5 572 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 RAB11FIP4Q86YS3 637 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 TEX2Q8IWB9 1127 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 PDCD2LQ9BRP1 358 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
LBR-207ENST00000487054 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 PRDM12Q9H4Q4 367 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 PRDM6Q9NQX0 595 aa11.67□□□□□ -0.54
LBR-207ENST00000487054 ZBBXA8MT70 800 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 B4DLN1 442 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 EIF3JO75822 258 aaKnown RBP11.66□□□□□ -0.54
LBR-207ENST00000487054 RXRAP19793 462 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 MRPL12P52815 198 aaKnown RBP11.66□□□□□ -0.54
LBR-207ENST00000487054 SP2Q02086 613 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 ADGRE1Q14246 886 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 HIC1Q14526 733 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 BRDTQ58F21 947 aaPredicted RBP11.66□□□□□ -0.54
LBR-207ENST00000487054 NFRKBQ6P4R8 1299 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 FCHSD1Q86WN1 690 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 CMTR1Q8N1G2 835 aaKnown RBP11.66□□□□□ -0.54
LBR-207ENST00000487054 SAMD3Q8N6K7 520 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 FANCBQ8NB91 859 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 DHX38Q92620 1227 aaKnown RBP11.66□□□□□ -0.54
LBR-207ENST00000487054 WNT8BQ93098 351 aa11.66□□□□□ -0.54
LBR-207ENST00000487054 ZNF274Q96GC6 653 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms