RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 GABPB1Q06547 395 aaPredicted RBP18.83■□□□□ 0.6
FDPS-212ENST00000487002 AOC3Q16853 763 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 SHROOM1Q2M3G4 852 aaPredicted RBP18.83■□□□□ 0.6
FDPS-212ENST00000487002 GRIPAP1Q4V328 841 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 ZCWPW2Q504Y3 356 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 FAM26FQ5R3K3 315 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 RBM26Q5T8P6 1007 aaKnown RBP18.83■□□□□ 0.6
FDPS-212ENST00000487002 FBXO11Q86XK2 927 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 CCDC65Q8IXS2 484 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 PCMTD1Q96MG8 357 aaPredicted RBP18.83■□□□□ 0.6
FDPS-212ENST00000487002 PANK4Q9NVE7 773 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 HERC5Q9UII4 1024 aaKnown RBP18.83■□□□□ 0.6
FDPS-212ENST00000487002 SIK3Q9Y2K2 1263 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 ATAD5Q96QE3 1844 aa18.82■□□□□ 0.6
FDPS-212ENST00000487002 SREBF1P36956 1147 aa18.82■□□□□ 0.6
FDPS-212ENST00000487002 TRAF1Q13077 416 aa18.82■□□□□ 0.6
FDPS-212ENST00000487002 FHOD1Q9Y613 1164 aa18.82■□□□□ 0.6
FDPS-212ENST00000487002 PITPNM2Q9BZ72 1349 aa18.82■□□□□ 0.6
FDPS-212ENST00000487002 GDF11O95390 407 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 PLA2G4BP0C869 781 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 BMP3P12645 472 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 ZSCAN20P17040 1043 aaPredicted RBP18.81■□□□□ 0.6
FDPS-212ENST00000487002 KLK7P49862 253 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 AMPD2Q01433 879 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 ERMNQ8TAM6 284 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 ETNPPLQ8TBG4 499 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 EEF2KMTQ96G04 330 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 EDEM3Q9BZQ6 932 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 NHEJ1Q9H9Q4 299 aaPredicted RBP18.81■□□□□ 0.6
FDPS-212ENST00000487002 FRMD3A2A2Y4 597 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 KRT86O43790 486 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 FKBP3Q00688 224 aaKnown RBP18.81■□□□□ 0.6
FDPS-212ENST00000487002 CEP63Q96MT8 703 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 TDRD3Q9H7E2 651 aaKnown RBP18.81■□□□□ 0.6
FDPS-212ENST00000487002 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 KIAA1024Q9UPX6 916 aa18.81■□□□□ 0.6
FDPS-212ENST00000487002 KIF13BQ9NQT8 1826 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 SPDYE3A6NKU9 549 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 GNA14O95837 355 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 ABL1P00519 1130 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 PNMA6AP0CW24 399 aaPredicted RBP18.8■□□□□ 0.6
FDPS-212ENST00000487002 CHRNA5P30532 468 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 CIITAP33076 1130 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 SPIRE1Q08AE8 756 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 FAM20AQ96MK3 541 aa18.8■□□□□ 0.6
FDPS-212ENST00000487002 POTEB3A0JP26 581 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 POTECB2RU33 542 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 PIK3CDO00329 1044 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 GH2P01242 217 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 CCDC122Q5T0U0 273 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 UTP14CQ5TAP6 766 aaKnown RBP18.79■□□□□ 0.6
FDPS-212ENST00000487002 POTEBQ6S5H4 581 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 KIAA1328Q86T90 577 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 GPBP1Q86WP2 473 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 KCTD17Q8N5Z5 321 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 GJA10Q969M2 543 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 CSRNP1Q96S65 589 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 TSGA10Q9BZW7 698 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 TMOD2Q9NZR1 351 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 GUCA1BQ9UMX6 200 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 PCDHA2Q9Y5H9 948 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 COL4A3BPQ9Y5P4 624 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 CCDC151A5D8V7 595 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 E9PMD0 336 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 MARSP56192 900 aaKnown RBP18.79■□□□□ 0.6
FDPS-212ENST00000487002 BRD3Q15059 726 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 CC2D1AQ6P1N0 951 aaPredicted RBP18.79■□□□□ 0.6
FDPS-212ENST00000487002 PPP4R3CPQ6ZMV5 832 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 MSANTD4Q8NCY6 345 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 JAKMIP2Q96AA8 810 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 LENG9Q96B70 501 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 PARD6BQ9BYG5 372 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 MYO6Q9UM54 1294 aa18.79■□□□□ 0.6
FDPS-212ENST00000487002 PPIP5K2O43314 1243 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 CYP11B2P19099 503 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 SLC12A3P55017 1021 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 DMTNQ08495 405 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 IKQ13123 557 aaPredicted RBP18.78■□□□□ 0.6
FDPS-212ENST00000487002 ZC3H3Q8IXZ2 948 aaKnown RBP18.78■□□□□ 0.6
FDPS-212ENST00000487002 PRMT6Q96LA8 375 aaPredicted RBP18.78■□□□□ 0.6
FDPS-212ENST00000487002 CTAGE15A4D2H0 777 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 YDJCA8MPS7 323 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 MED24O75448 989 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 SSBP05455 408 aaKnown RBP eCLIP18.78■□□□□ 0.6
FDPS-212ENST00000487002 TUBBP07437 444 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 CYP3A4P08684 503 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 CTAGE8P0CG41 777 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 RPA1P27694 616 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 VAV2P52735 878 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 LRRC41Q15345 812 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 TRAPPC11Q7Z392 1133 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 CTAGE6Q86UF2 777 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 CTAGE4Q8IX94 777 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 PURBQ96QR8 312 aaKnown RBP18.78■□□□□ 0.6
FDPS-212ENST00000487002 P2RX7Q99572 595 aaKnown RBP18.78■□□□□ 0.6
FDPS-212ENST00000487002 ARHGEF10LQ9HCE6 1279 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 ARFGAP3Q9NP61 516 aa18.78■□□□□ 0.6
FDPS-212ENST00000487002 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
FDPS-212ENST00000487002 ANO9A1A5B4 782 aa18.77■□□□□ 0.6
FDPS-212ENST00000487002 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms