RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 AOC1P19801 751 aa9.97□□□□□ -0.81
APTX-228ENST00000486724 ZAP70P43403 619 aa9.97□□□□□ -0.81
APTX-228ENST00000486724 ATXN1P54253 815 aaKnown RBP9.97□□□□□ -0.81
APTX-228ENST00000486724 CWF19L1Q69YN2 538 aaKnown RBP9.97□□□□□ -0.81
APTX-228ENST00000486724 ZC3H14Q6PJT7 736 aaKnown RBP9.97□□□□□ -0.81
APTX-228ENST00000486724 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
APTX-228ENST00000486724 MORC4Q8TE76 937 aa9.97□□□□□ -0.81
APTX-228ENST00000486724 DYNLL2Q96FJ2 89 aa9.97□□□□□ -0.81
APTX-228ENST00000486724 RIOK1Q9BRS2 568 aaKnown RBP9.97□□□□□ -0.81
APTX-228ENST00000486724 CRNKL1Q9BZJ0 848 aaKnown RBP9.97□□□□□ -0.81
APTX-228ENST00000486724 RNF146Q9NTX7 359 aa9.97□□□□□ -0.81
APTX-228ENST00000486724 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
APTX-228ENST00000486724 R4GN57 208 aa9.97□□□□□ -0.81
APTX-228ENST00000486724 ZFYVE26Q68DK2 2539 aa9.96□□□□□ -0.81
APTX-228ENST00000486724 NKRFO15226 690 aaKnown RBP eCLIP9.96□□□□□ -0.82
APTX-228ENST00000486724 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 CYP2D6P10635 497 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 NRIP1P48552 1158 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 NUCB1Q02818 461 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 PTK7Q13308 1070 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 PPP2R5BQ15173 497 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 PLEKHG4Q58EX7 1191 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 ZNF618Q5T7W0 954 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 ADGRD2Q7Z7M1 963 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 DCLK2Q8N568 766 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 DTWD2Q8NBA8 298 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 FLCNQ8NFG4 579 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 IL17RAQ96F46 866 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 ZNF512BQ96KM6 892 aaPredicted RBP9.96□□□□□ -0.82
APTX-228ENST00000486724 ASH1LQ9NR48 2969 aaKnown RBP9.96□□□□□ -0.82
APTX-228ENST00000486724 NR2E1Q9Y466 385 aa9.96□□□□□ -0.82
APTX-228ENST00000486724 MAGEB6P1A0A0J9YX57 407 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 RBM47A0AV96 593 aaKnown RBP9.95□□□□□ -0.82
APTX-228ENST00000486724 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 NDUFB10O96000 172 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 SP100P23497 879 aaPredicted RBP9.95□□□□□ -0.82
APTX-228ENST00000486724 CAMK1Q14012 370 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 CLP1Q92989 425 aaKnown RBP9.95□□□□□ -0.82
APTX-228ENST00000486724 RTP3Q9BQQ7 232 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 GTF2IRD1Q9UHL9 959 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 ADGRA3Q8IWK6 1321 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 LCTP09848 1927 aa9.95□□□□□ -0.82
APTX-228ENST00000486724 SOBPA7XYQ1 873 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 PRR5-ARHGAP8B1AHC4 643 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 F5H6K3 240 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 RAB11FIP3O75154 756 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 FDX1P10109 184 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 CLCN1P35523 988 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 ARHGAP8P85298 464 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 KLRC3Q07444 240 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 TRIM71Q2Q1W2 868 aaKnown RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 TKFCQ3LXA3 575 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 HSP90AB4PQ58FF6 505 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 RBM23Q86U06 439 aaKnown RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 CHD1LQ86WJ1 897 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 LRRC47Q8N1G4 583 aaKnown RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 GPR161Q8N6U8 529 aaKnown RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 SEPT8Q92599 483 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 NEK1Q96PY6 1258 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 RTKNQ9BST9 563 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 SMOC2Q9H3U7 446 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 DCP1AQ9NPI6 582 aaPredicted RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 CYP39A1Q9NYL5 469 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 ADD3Q9UEY8 706 aaKnown RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 FEM1BQ9UK73 627 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 PLAGL2Q9UPG8 496 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 EXOC6BQ9Y2D4 811 aa9.94□□□□□ -0.82
APTX-228ENST00000486724 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 FLNBO75369 2602 aaKnown RBP9.94□□□□□ -0.82
APTX-228ENST00000486724 LOC102724159A0A0B4J2E5 919 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.93□□□□□ -0.82
APTX-228ENST00000486724 DCDC2BA2VCK2 349 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 RBAK-RBAKDNI3L0D1 243 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 PI15O43692 258 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 TPM2P07951 284 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 SRGAP2BP0DMP2 458 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 CDK8P49336 464 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 LMNB2Q03252 620 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 PDE4BQ07343 736 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 COL9A3Q14050 684 aaPredicted RBP9.93□□□□□ -0.82
APTX-228ENST00000486724 PWP2Q15269 919 aaKnown RBP9.93□□□□□ -0.82
APTX-228ENST00000486724 C7orf31Q8N865 590 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 SCFD2Q8WU76 684 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 SDR42E1Q8WUS8 393 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 P2RX5Q93086 422 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 DBNDD2Q9BQY9 259 aa9.93□□□□□ -0.82
APTX-228ENST00000486724 GREB1LQ9C091 1923 aaPredicted RBP9.93□□□□□ -0.82
APTX-228ENST00000486724 MAST4O15021 2626 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 RSPH10B2B2RC85 870 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 SURF6O75683 361 aaKnown RBP9.92□□□□□ -0.82
APTX-228ENST00000486724 RSPH10BP0C881 870 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 ALAS1P13196 640 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 DNAJB1P25685 340 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 ALDH5A1P51649 535 aaPredicted RBP9.92□□□□□ -0.82
APTX-228ENST00000486724 NAALADL2Q58DX5 795 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 ANKRD45Q5TZF3 282 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 C16orf86Q6ZW13 317 aa9.92□□□□□ -0.82
APTX-228ENST00000486724 ERC1Q8IUD2 1116 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms