RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 TRIP12Q14669 1992 aaPredicted RBP7.55□□□□□ -1.2
CAPN13-206ENST00000485248 C5orf67F2Z3F1 127 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 GRM6O15303 877 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 NBNO60934 754 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 IGSF3O75054 1194 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 BRD1O95696 1058 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 UQCRFS1P1P0C7P4 283 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 SHMT1P34896 483 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 NRIP1P48552 1158 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 VARS2Q5ST30 1063 aaKnown RBP7.55□□□□□ -1.2
CAPN13-206ENST00000485248 FAM83BQ5T0W9 1011 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 PADI6Q6TGC4 694 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
CAPN13-206ENST00000485248 CENPQQ7L2Z9 268 aaPredicted RBP7.55□□□□□ -1.2
CAPN13-206ENST00000485248 AMOTL1Q8IY63 956 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 FAM133AQ8N9E0 248 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 RIN2Q8WYP3 895 aaPredicted RBP7.55□□□□□ -1.2
CAPN13-206ENST00000485248 DDX1Q92499 740 aaKnown RBP7.55□□□□□ -1.2
CAPN13-206ENST00000485248 IL17RAQ96F46 866 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 ACAD9Q9H845 621 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 VTA1Q9NP79 307 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 HOMER2Q9NSB8 354 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 FBXO28Q9NVF7 368 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 CLEC1BQ9P126 229 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 GMEB2Q9UKD1 530 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 ISY1Q9ULR0 285 aaKnown RBP7.55□□□□□ -1.2
CAPN13-206ENST00000485248 ADAMTS5Q9UNA0 930 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 PCDHGA10Q9Y5H3 936 aa7.55□□□□□ -1.2
CAPN13-206ENST00000485248 CHD6Q8TD26 2715 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 PROS1P07225 676 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 CKBP12277 381 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 BMPR1AP36894 532 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 TIMM10P62072 90 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 DUSP28Q4G0W2 176 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 SEPT8Q92599 483 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 BORCS6Q96GS4 357 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 WDR11Q9BZH6 1224 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 KATNBL1Q9H079 304 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 TLE6Q9H808 572 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 PRM3Q9NNZ6 103 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 SWAP70Q9UH65 585 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 HDAC5Q9UQL6 1122 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 SALL2Q9Y467 1007 aaPredicted RBP7.54□□□□□ -1.2
CAPN13-206ENST00000485248 TRIOO75962 3097 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 ATG2AQ2TAZ0 1938 aa7.54□□□□□ -1.2
CAPN13-206ENST00000485248 NAV1Q8NEY1 1877 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 NKRFO15226 690 aaKnown RBP eCLIP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 SPTLC1O15269 473 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 ZIC2O95409 532 aaPredicted RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 CYP7A1P22680 504 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 PLCD1P51178 756 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 DYNLL1P63167 89 aaKnown RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 PDE4BQ07343 736 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 BTG3Q14201 252 aaPredicted RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 PPP2R5BQ15173 497 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 NFKBIBQ15653 356 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 KIAA1755Q5JYT7 1200 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 TTC39AQ5SRH9 613 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 CWF19L1Q69YN2 538 aaKnown RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 CES5AQ6NT32 575 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 TYW1BQ6NUM6 668 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 TDRD5Q8NAT2 981 aaKnown RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 PRPF38AQ8NAV1 312 aaKnown RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 NETO1Q8TDF5 533 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 SPIRE2Q8WWL2 714 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 TOP1MTQ969P6 601 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 KIFC2Q96AC6 838 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 NECTIN4Q96NY8 510 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 RAVER2Q9HCJ3 691 aaKnown RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 GPR108Q9NPR9 543 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 PDGFCQ9NRA1 345 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 ANKFY1Q9P2R3 1169 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 ADD3Q9UEY8 706 aaKnown RBP7.53□□□□□ -1.2
CAPN13-206ENST00000485248 ZMIZ1Q9ULJ6 1067 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 LHX6Q9UPM6 363 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 USTQ9Y2C2 406 aa7.53□□□□□ -1.2
CAPN13-206ENST00000485248 ADGRA3Q8IWK6 1321 aa7.52□□□□□ -1.2
CAPN13-206ENST00000485248 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.52□□□□□ -1.21
CAPN13-206ENST00000485248 ATP2A1O14983 1001 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 PTGS1P23219 599 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
CAPN13-206ENST00000485248 OAZ1P54368 228 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 CNTN2Q02246 1040 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 TUSC1Q2TAM9 212 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 NAALADL2Q58DX5 795 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 DHX37Q8IY37 1157 aaKnown RBP7.52□□□□□ -1.21
CAPN13-206ENST00000485248 MIGA1Q8NAN2 632 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 REPS2Q8NFH8 660 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 DBF4BQ8NFT6 615 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 SUSD6Q92537 303 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 CDCA3Q99618 268 aaPredicted RBP7.52□□□□□ -1.21
CAPN13-206ENST00000485248 KATNAL1Q9BW62 490 aa7.52□□□□□ -1.21
CAPN13-206ENST00000485248 MCM9Q9NXL9 1143 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms