RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SEMA3FQ13275 785 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 ITGA7Q13683 1181 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 ME3Q16798 604 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 KCNV1Q6PIU1 500 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 RASGRP4Q8TDF6 673 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 MTG1Q9BT17 334 aaPredicted RBP18.58■□□□□ 0.56
DDR1-246ENST00000485023 BCAS3Q9H6U6 928 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 DNAH12Q6ZR08 3092 aa18.58■□□□□ 0.56
DDR1-246ENST00000485023 DCDC2CA8MYV0 355 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 DEXIO95424 95 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 ZNF286BP0CG31 522 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 SP4Q02446 784 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 FAM47CQ5HY64 1035 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 CELF3Q5SZQ8 465 aaKnown RBP18.57■□□□□ 0.56
DDR1-246ENST00000485023 NLRX1Q86UT6 975 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 REXO1Q8N1G1 1221 aaKnown RBP18.57■□□□□ 0.56
DDR1-246ENST00000485023 CCDC148Q8NFR7 591 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 SPATA33Q96N06 139 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 ZMYND12Q9H0C1 365 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 MLXIPQ9HAP2 919 aa18.57■□□□□ 0.56
DDR1-246ENST00000485023 ESYT2A0FGR8 921 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 TRIM43BA6NCK2 446 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 SPATA31C2B4DYI2 1134 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 CDKL5O76039 1030 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 FOSP01100 380 aaPredicted RBP18.56■□□□□ 0.56
DDR1-246ENST00000485023 ITGB5P18084 799 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 CLK2P49760 499 aaKnown RBP18.56■□□□□ 0.56
DDR1-246ENST00000485023 CDK7P50613 346 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 NLRP5P59047 1200 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 FAAP100Q0VG06 881 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 AP3B2Q13367 1082 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 HSDL1Q3SXM5 330 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 MYSM1Q5VVJ2 828 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 XRRA1Q6P2D8 792 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 ANKRD33Q7Z3H0 272 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 TRIM43Q96BQ3 446 aaPredicted RBP18.56■□□□□ 0.56
DDR1-246ENST00000485023 KIF2CQ99661 725 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 LBHD1Q9BQE6 289 aaPredicted RBP18.56■□□□□ 0.56
DDR1-246ENST00000485023 GLT8D2Q9H1C3 349 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 TMEM39AQ9NV64 488 aa18.56■□□□□ 0.56
DDR1-246ENST00000485023 MROH7Q68CQ1 1323 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 CTDNEP1O95476 244 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 GNA11P29992 359 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 ICAM3P32942 547 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 MTMR1Q13613 665 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 CYFIP1Q7L576 1253 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 FAM126BQ8IXS8 530 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 PPTC7Q8NI37 304 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 GTF3C6Q969F1 213 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 EMID1Q96A84 441 aaPredicted RBP18.55■□□□□ 0.56
DDR1-246ENST00000485023 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
DDR1-246ENST00000485023 TELO2Q9Y4R8 837 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 UBIAD1Q9Y5Z9 338 aa18.55■□□□□ 0.56
DDR1-246ENST00000485023 NOP56O00567 594 aaKnown RBP18.54■□□□□ 0.56
DDR1-246ENST00000485023 TLR3O15455 904 aaKnown RBP18.54■□□□□ 0.56
DDR1-246ENST00000485023 KPNA6O60684 536 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 TGFB3P10600 412 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 ITGB8P26012 769 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 SREBF1P36956 1147 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 DGKDQ16760 1214 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 NBPF20Q3BBV1 942 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 CYP2W1Q8TAV3 490 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 BADQ92934 168 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 GPRASP2Q96D09 838 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 TOX2Q96NM4 488 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 GDF15Q99988 308 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 CEP290O15078 2479 aa18.54■□□□□ 0.56
DDR1-246ENST00000485023 LTBP2Q14767 1821 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 B4GALT4O60513 344 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 ATP9AO75110 1047 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 RAG1P15918 1043 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 ZNF76P36508 570 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
DDR1-246ENST00000485023 FOSBP53539 338 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 ARHGAP4P98171 946 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 NEDD9Q14511 834 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 SLC43A3Q8NBI5 491 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 UIMC1Q96RL1 719 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 MXRA8Q9BRK3 442 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 ALG1Q9BT22 464 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 PPP1R12CQ9BZL4 782 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 UBE2OQ9C0C9 1292 aaKnown RBP18.53■□□□□ 0.56
DDR1-246ENST00000485023 JADE2Q9NQC1 790 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 SH3GLB2Q9NR46 395 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 GJB4Q9NTQ9 266 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 TRMT13Q9NUP7 481 aaKnown RBP18.53■□□□□ 0.56
DDR1-246ENST00000485023 KCNJ14Q9UNX9 436 aa18.53■□□□□ 0.56
DDR1-246ENST00000485023 STK36Q9NRP7 1315 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 JAK2O60674 1132 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 ST3GAL1Q11201 340 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 METTL7BQ6UX53 244 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 BICD2Q8TD16 824 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 KAT2BQ92831 832 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 PRO3102Q9H379 93 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 ORC3Q9UBD5 711 aaPredicted RBP18.52■□□□□ 0.56
DDR1-246ENST00000485023 TBX21Q9UL17 535 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 PCDHA4Q9UN74 947 aa18.52■□□□□ 0.56
DDR1-246ENST00000485023 KIAA0355O15063 1070 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms