RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 INVSQ9Y283 1065 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 MROH6A6NGR9 719 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 TADA3O75528 432 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 PLATP00750 562 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 FGRP09769 529 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 ADAM17P78536 824 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 LSAMPQ13449 338 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 FXNQ16595 210 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 SSBP3Q9BWW4 388 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-207ENST00000484275 NPFFR2Q9Y5X5 522 aa7.29□□□□□ -1.24
SCAF11-207ENST00000484275 H7BY64 318 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 HGSO14964 777 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-207ENST00000484275 ZNF28P17035 718 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 PUM1Q14671 1186 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCAF11-207ENST00000484275 STEAP3Q658P3 488 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 VPS37DQ86XT2 251 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 HOMEZQ8IX15 550 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCAF11-207ENST00000484275 ZSWIM3Q96MP5 696 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.28□□□□□ -1.243e-7■■■■□ 21.8
SCAF11-207ENST00000484275 SMPD4Q9NXE4 827 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 CLDND1Q9NY35 253 aa7.28□□□□□ -1.24
SCAF11-207ENST00000484275 COA3Q9Y2R0 106 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-207ENST00000484275 LRG1P02750 347 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 PPP2R2AP63151 447 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 NKX3-2P78367 333 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 KIAA2012Q0VF49 1180 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 EMC4Q5J8M3 183 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 TEPPQ6URK8 271 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 CELF2-AS1Q8N7Q2 184 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 BORCS6Q96GS4 357 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 CHAMP1Q96JM3 812 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 GPR20Q99678 358 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 TINF2Q9BSI4 451 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 DTLQ9NZJ0 730 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 PCDHB4Q9Y5E5 795 aa7.27□□□□□ -1.25
SCAF11-207ENST00000484275 A0A1W2PQU0 124 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 B4GALT3O60512 393 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 MSCO60682 206 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 MLLT6P55198 1093 aaPredicted RBP7.26□□□□□ -1.25
SCAF11-207ENST00000484275 MCF2L2Q86YR7 1114 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 LGI4Q8N135 537 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 MBD6Q96DN6 1003 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 TOE1Q96GM8 510 aaKnown RBP7.26□□□□□ -1.25
SCAF11-207ENST00000484275 YIPF4Q9BSR8 244 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 NGRNQ9NPE2 291 aaKnown RBP7.26□□□□□ -1.25
SCAF11-207ENST00000484275 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 MYRFQ9Y2G1 1151 aa7.26□□□□□ -1.25
SCAF11-207ENST00000484275 CHRNA2Q15822 529 aa7.25□□□□□ -1.25
SCAF11-207ENST00000484275 EEPD1Q7L9B9 569 aa7.25□□□□□ -1.25
SCAF11-207ENST00000484275 C8orf49Q96NF6 230 aa7.25□□□□□ -1.25
SCAF11-207ENST00000484275 PPARGC1AQ9UBK2 798 aaKnown RBP7.25□□□□□ -1.25
SCAF11-207ENST00000484275 DLX3O60479 287 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 DGKIO75912 1065 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 IL13P35225 146 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 MAP4K2Q12851 820 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 PRAMEF18Q5VWM3 479 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 LIMS2Q7Z4I7 341 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 HNRNPLLQ8WVV9 542 aaKnown RBP7.24□□□□□ -1.25
SCAF11-207ENST00000484275 ZCCHC14Q8WYQ9 949 aaKnown RBP7.24□□□□□ -1.25
SCAF11-207ENST00000484275 LOXL4Q96JB6 756 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 LCORQ96JN0 433 aaPredicted RBP7.24□□□□□ -1.25
SCAF11-207ENST00000484275 YTHDC1Q96MU7 727 aaKnown RBP7.24□□□□□ -1.25
SCAF11-207ENST00000484275 SAMD11Q96NU1 681 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 IER2Q9BTL4 223 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 JAM3Q9BX67 310 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 EPN3Q9H201 632 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 EPB41L1Q9H4G0 881 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 ST7Q9NRC1 585 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 MYOTQ9UBF9 498 aa7.24□□□□□ -1.25
SCAF11-207ENST00000484275 TCF3P15923 654 aa7.23□□□□□ -1.25
SCAF11-207ENST00000484275 BORAQ6PGQ7 559 aa7.23□□□□□ -1.25
SCAF11-207ENST00000484275 FAM124AQ86V42 546 aa7.23□□□□□ -1.25
SCAF11-207ENST00000484275 TMPRSS5Q9H3S3 457 aa7.23□□□□□ -1.25
SCAF11-207ENST00000484275 C9orf118A6NHY6 69 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 ZNF20P17024 532 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 TNFRSF1AP19438 455 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 TMC5Q6UXY8 1006 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 PROSER1Q86XN7 944 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 TTC9BQ8N6N2 239 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 KCTD13Q8WZ19 329 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 C1QTNF3Q9BXJ4 246 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 SMOC1Q9H4F8 434 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 GPR27Q9NS67 375 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 CROTQ9UKG9 612 aa7.22□□□□□ -1.25
SCAF11-207ENST00000484275 ARID5AQ03989 594 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 GNL2Q13823 731 aaKnown RBP7.21□□□□□ -1.26
SCAF11-207ENST00000484275 CPZQ66K79 652 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 PIP4K2CQ8TBX8 421 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 CLEC4DQ8WXI8 215 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 ZNF428Q96B54 188 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 CLIC6Q96NY7 704 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 PPP4R1LQ9P1A2 415 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 ASH2LQ9UBL3 628 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 ST6GALNAC2Q9UJ37 374 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 ZNF536O15090 1300 aa7.21□□□□□ -1.26
SCAF11-207ENST00000484275 MATN3O15232 486 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 CYP1A1P04798 512 aaPredicted RBP7.2□□□□□ -1.26
SCAF11-207ENST00000484275 COL6A1P12109 1028 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms