RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 LBHD1Q9BQE6 289 aaPredicted RBP25.39■■□□□ 1.66
CNTNAP3B-208ENST00000484254 PCDH10Q9P2E7 1040 aa25.39■■□□□ 1.66
CNTNAP3B-208ENST00000484254 TPCN1Q9ULQ1 816 aa25.39■■□□□ 1.66
CNTNAP3B-208ENST00000484254 KIAA0355O15063 1070 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 FIBPO43427 364 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 PPFIA3O75145 1194 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 GGPS1O95749 300 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 UBA1P22314 1058 aaKnown RBP25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 CLK2P49760 499 aaKnown RBP25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 CPLX2Q6PUV4 134 aaKnown RBP25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 NLRX1Q86UT6 975 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 FAM126BQ8IXS8 530 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 TRIM22Q8IYM9 498 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 PPTC7Q8NI37 304 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 ZMYND12Q9H0C1 365 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 TMEM39AQ9NV64 488 aa25.38■■□□□ 1.65
CNTNAP3B-208ENST00000484254 TLR3O15455 904 aaKnown RBP25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 MDM2Q00987 491 aaPredicted RBP25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SSRP1Q08945 709 aaKnown RBP25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SEMA3FQ13275 785 aa25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 AP3B2Q13367 1082 aa25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SLKQ9H2G2 1235 aaPredicted RBP25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 C6orf50Q9HD87 102 aa25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 LTBP2Q14767 1821 aa25.37■■□□□ 1.65
CNTNAP3B-208ENST00000484254 MYH7BA7E2Y1 1941 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 PFKFB2O60825 505 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 CD4P01730 458 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 NEK4P51957 841 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SCRN1Q12765 414 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 DGKDQ16760 1214 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 TMEM260Q9NX78 707 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 UBIAD1Q9Y5Z9 338 aa25.36■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SCN10AQ9Y5Y9 1956 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 A0A1W2PPC1 479 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 ITGB5P18084 799 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 NEDD9Q14511 834 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 CCDC148Q8NFR7 591 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 GPRASP2Q96D09 838 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SPATA33Q96N06 139 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 ANO3Q9BYT9 981 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 MLXIPQ9HAP2 919 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SH3GLB2Q9NR46 395 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 TBX21Q9UL17 535 aa25.35■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SORBS3O60504 671 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 DEXIO95424 95 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 HOXD8P13378 290 aaPredicted RBP25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 GNA11P29992 359 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 NBPF20Q3BBV1 942 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 HSDL1Q3SXM5 330 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 MCTP2Q6DN12 878 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 CDHR1Q96JP9 859 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 PGBD1Q96JS3 809 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SENP7Q9BQF6 1050 aa25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 UBE2OQ9C0C9 1292 aaKnown RBP25.34■■□□□ 1.65
CNTNAP3B-208ENST00000484254 PPFIA4O75335 1185 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 CDKL5O76039 1030 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 RAG1P15918 1043 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 ITGB8P26012 769 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 SREBF1P36956 1147 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 JAKMIP3Q5VZ66 844 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 NFRKBQ6P4R8 1299 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 BADQ92934 168 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 BCAS3Q9H6U6 928 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 VPS54Q9P1Q0 977 aa25.33■■□□□ 1.65
CNTNAP3B-208ENST00000484254 B4GALT4O60513 344 aa25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 METTL7BQ6UX53 244 aa25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 REXO1Q8N1G1 1221 aaKnown RBP25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 GIMAP8Q8ND71 665 aaPredicted RBP25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 BICD2Q8TD16 824 aa25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 KAT2BQ92831 832 aa25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 TRPV6Q9H1D0 765 aa25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 JADE2Q9NQC1 790 aa25.32■■□□□ 1.64
CNTNAP3B-208ENST00000484254 ADAMTS3O15072 1205 aa25.31■■□□□ 1.64
CNTNAP3B-208ENST00000484254 MAFGO15525 162 aa25.31■■□□□ 1.64
CNTNAP3B-208ENST00000484254 TIMP1P01033 207 aa25.31■■□□□ 1.64
CNTNAP3B-208ENST00000484254 PTPN11Q06124 597 aaPredicted RBP25.31■■□□□ 1.64
CNTNAP3B-208ENST00000484254 MTMR1Q13613 665 aa25.31■■□□□ 1.64
CNTNAP3B-208ENST00000484254 CYFIP1Q7L576 1253 aa25.31■■□□□ 1.64
CNTNAP3B-208ENST00000484254 MXRA8Q9BRK3 442 aa25.31■■□□□ 1.64
CNTNAP3B-208ENST00000484254 ME3Q16798 604 aa25.3■■□□□ 1.64
CNTNAP3B-208ENST00000484254 C22orf23Q9BZE7 217 aa25.3■■□□□ 1.64
CNTNAP3B-208ENST00000484254 RANBP2P49792 3224 aaKnown RBP25.3■■□□□ 1.64
CNTNAP3B-208ENST00000484254 TRIOBPQ9H2D6 2365 aa25.3■■□□□ 1.64
CNTNAP3B-208ENST00000484254 NOP56O00567 594 aaKnown RBP25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 ATP9AO75110 1047 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 F2P00734 622 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 ZNF286BP0CG31 522 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 KCNA2P16389 499 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 RBM25P49756 843 aaKnown RBP25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 NLRP5P59047 1200 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 ARHGAP4P98171 946 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 CEP55Q53EZ4 464 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 FAM47CQ5HY64 1035 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 FAM177A1Q8N128 213 aaPredicted RBP25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 CRYGNQ8WXF5 182 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 KIF2CQ99661 725 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 KATNAL1Q9BW62 490 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 STK36Q9NRP7 1315 aa25.29■■□□□ 1.64
CNTNAP3B-208ENST00000484254 HAS3O00219 553 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 LARGE1O95461 756 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms