RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 LRRC26Q2I0M4 334 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PPP4R3BQ5MIZ7 849 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 TRMT44Q8IYL2 757 aaKnown RBP7.93□□□□□ -1.14
BRCA1-216ENST00000484087 FAM133AQ8N9E0 248 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 CHST13Q8NET6 341 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PPP1R13LQ8WUF5 828 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 ANKS1AQ92625 1134 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PIGSQ96S52 555 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 C11orf49Q9H6J7 331 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 GRPEL1Q9HAV7 217 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PDGFCQ9NRA1 345 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-216ENST00000484087 COL20A1Q9P218 1284 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 SYNRGQ9UMZ2 1314 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 KIAA1217Q5T5P2 1943 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 KLRF2D3W0D1 207 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 OPLAHO14841 1288 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 SEPT4O43236 478 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 CDC27P30260 824 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 ADCYAP1R1P41586 468 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 TROAPQ12815 778 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 GRM4Q14833 912 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 SF3A1Q15459 793 aaKnown RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 NTRK3Q16288 839 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 ASPRV1Q53RT3 343 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 GPATCH4Q5T3I0 446 aaKnown RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 PRPF38BQ5VTL8 546 aaKnown RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 FAM173BQ6P4H8 233 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 LRSAM1Q6UWE0 723 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 CCDC82Q8N4S0 544 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 BICD2Q8TD16 824 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 LEO1Q8WVC0 666 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 PHKBQ93100 1093 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 RNF26Q9BY78 433 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 SENP6Q9GZR1 1112 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 KATNBL1Q9H079 304 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 TMEM63CQ9P1W3 806 aa7.92□□□□□ -1.14
BRCA1-216ENST00000484087 RBM27Q9P2N5 1060 aaKnown RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 TFIP11Q9UBB9 837 aaKnown RBP7.92□□□□□ -1.14
BRCA1-216ENST00000484087 SYCE3A1L190 88 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 PALM3A6NDB9 673 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-216ENST00000484087 COL6A1P12109 1028 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 COPB2P35606 906 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 GNAQP50148 359 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 ALDH5A1P51649 535 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-216ENST00000484087 RPS6P62753 249 aaKnown RBP7.91□□□□□ -1.14
BRCA1-216ENST00000484087 BEX3Q00994 111 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 ACVR2BQ13705 512 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 STK38Q15208 465 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 LRRC41Q15345 812 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 CCDC144BQ3MJ40 725 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 KRT40Q6A162 431 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 RNF207Q6ZRF8 634 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 NECAB2Q7Z6G3 386 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 KCNG4Q8TDN1 519 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 BRMS1Q9HCU9 246 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 XPNPEP3Q9NQH7 507 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 DDX19AQ9NUU7 478 aaKnown RBP7.91□□□□□ -1.14
BRCA1-216ENST00000484087 SLC5A4Q9NY91 659 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 FBXO40Q9UH90 709 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 RCOR1Q9UKL0 485 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 CDH23Q9H251 3354 aa7.91□□□□□ -1.14
BRCA1-216ENST00000484087 TRIOBPQ9H2D6 2365 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 MYH7BA7E2Y1 1941 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 EVI5O60447 810 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 SORBS3O60504 671 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 ADAMTS4O75173 837 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 YEATS4O95619 227 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 AKR1A1P14550 325 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 HOXA13P31271 388 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-216ENST00000484087 CEBPZQ03701 1054 aaKnown RBP7.9□□□□□ -1.14
BRCA1-216ENST00000484087 MAMDC4Q6UXC1 1216 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 COPS5Q92905 334 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 TAAR1Q96RJ0 339 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 MAP3K14Q99558 947 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 TSPY26PQ9H489 355 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 FAM217BQ9NTX9 383 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-216ENST00000484087 RTEL1Q9NZ71 1219 aa7.9□□□□□ -1.14
BRCA1-216ENST00000484087 DIS3Q9Y2L1 958 aaKnown RBP7.9□□□□□ -1.14
BRCA1-216ENST00000484087 DNM1LO00429 736 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 PRPF3O43395 683 aaKnown RBP7.89□□□□□ -1.15
BRCA1-216ENST00000484087 ARIH2O95376 493 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 CFBP00751 764 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 C6orf222P0C671 652 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-216ENST00000484087 FDX1P10109 184 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 RARBP10826 455 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 SMPD1P17405 629 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 EIF2AK2P19525 551 aaKnown RBP7.89□□□□□ -1.15
BRCA1-216ENST00000484087 ME1P48163 572 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 NASPP49321 788 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-216ENST00000484087 CAMK2BQ13554 666 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 TKFCQ3LXA3 575 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 TRIM60Q495X7 471 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 MYSM1Q5VVJ2 828 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 TAPT1Q6NXT6 567 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 CCDC73Q6ZRK6 1079 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 FBXO11Q86XK2 927 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 SRBD1Q8N5C6 995 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms