RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 PCDHB14Q9Y5E9 798 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 KTN1Q86UP2 1357 aaKnown RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 ABCC6O95255 1503 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 TRPM1Q7Z4N2 1603 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 GLTPD2A6NH11 291 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 NRDCO43847 1150 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 PRAMEF1O95521 474 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 AMPHP49418 695 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 NBPF6Q5VWK0 638 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 OVOS1Q6IE37 1185 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 RNF111Q6ZNA4 994 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 DAGLBQ8NCG7 672 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 LINC00116Q8NCU8 138 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 ENOX1Q8TC92 643 aaKnown RBP5.01□□□□□ -1.61
LRCH3-217ENST00000483442 PIGBQ92521 554 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 SMARCC1Q92922 1105 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-217ENST00000483442 MAP6Q96JE9 813 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 NBPF4Q96M43 638 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 KCNC2Q96PR1 638 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 ANTXR1Q9H6X2 564 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 KCNQ5Q9NR82 932 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 ZMYM5Q9UJ78 669 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 TCFL5Q9UL49 500 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 TUBGCP6Q96RT7 1819 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 PALLDQ8WX93 1383 aa5.01□□□□□ -1.61
LRCH3-217ENST00000483442 QSER1Q2KHR3 1735 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 WNK3Q9BYP7 1800 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 OR14I1A6ND48 311 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 PATL2C9JE40 543 aaKnown RBP5□□□□□ -1.61
LRCH3-217ENST00000483442 SYPP08247 313 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 PI3P19957 117 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 CHRNA5P30532 468 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 VIPR1P32241 457 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 CLCQ05315 142 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 CEP128Q6ZU80 1094 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 RAPGEF4Q8WZA2 1011 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 LRRC3Q9BY71 257 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 PRDM14Q9GZV8 571 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 CNTD2Q9H8S5 307 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 PXDNLA1KZ92 1463 aa5□□□□□ -1.61
LRCH3-217ENST00000483442 ATE1O95260 518 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 RAG1P15918 1043 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 HOXC9P31274 260 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 RFC4P35249 363 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 EIF4A3P38919 411 aaKnown RBP4.99□□□□□ -1.61
LRCH3-217ENST00000483442 RGS19P49795 217 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 SRSF3P84103 164 aaKnown RBP4.99□□□□□ -1.61
LRCH3-217ENST00000483442 ITPK1Q13572 414 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 VMACQ2NL98 169 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 TMEM192Q8IY95 271 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 ZNF655Q8N720 491 aaPredicted RBP4.99□□□□□ -1.61
LRCH3-217ENST00000483442 ATG4CQ96DT6 458 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 SLC12A5Q9H2X9 1139 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 ZCCHC4Q9H5U6 513 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 CNNM2Q9H8M5 875 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 GMIPQ9P107 970 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 ADAMTS1Q9UHI8 967 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 ASAP1Q9ULH1 1129 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 PLEKHG2Q9H7P9 1386 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 PIK3C2AO00443 1686 aa4.99□□□□□ -1.61
LRCH3-217ENST00000483442 NFAT5O94916 1531 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 FADS2P1A8MWK0 482 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 CYP27B1O15528 508 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 GYS1P13807 737 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 CTSKP43235 329 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 KIR2DL1P43626 348 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-217ENST00000483442 KIR2DL2P43627 348 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-217ENST00000483442 PWP1Q13610 501 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 CWF19L2Q2TBE0 894 aaKnown RBP4.98□□□□□ -1.61
LRCH3-217ENST00000483442 CDCP2Q5VXM1 449 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 HDGFL2Q7Z4V5 671 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-217ENST00000483442 TMEFF1Q8IYR6 380 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 ZNF296Q8WUU4 475 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-217ENST00000483442 DACT3Q96B18 629 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-217ENST00000483442 ASCC2Q9H1I8 757 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-217ENST00000483442 EHMT1Q9H9B1 1298 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 UBP1Q9NZI7 540 aa4.98□□□□□ -1.61
LRCH3-217ENST00000483442 MAP3K19Q56UN5 1328 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 LY75O60449 1722 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 N4BP2Q86UW6 1770 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 MEIS1O00470 390 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 SIGLEC6O43699 453 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 HSPA8P11142 646 aaKnown RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 CDR1P51861 262 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 PCBP3P57721 371 aaKnown RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 RTP1P59025 263 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 YBX1P67809 324 aaKnown RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 SLC14A2Q15849 920 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 DEFB115Q30KQ5 88 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 HSF5Q4G112 596 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 SEZ6Q53EL9 994 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 ZNF385BQ569K4 471 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 TCERG1LQ5VWI1 586 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 DIEXFQ68CQ4 756 aaKnown RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 TMEM52Q8NDY8 209 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 RELTQ969Z4 430 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 COG3Q96JB2 828 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 XYLT2Q9H1B5 865 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 MRS2Q9HD23 443 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms