RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MRVI1Q9Y6F6 885 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 GBF1Q92538 1859 aa8.63□□□□□ -1.03
CSDE1-206ENST00000483030 NEDD4P46934 1319 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 CCDC171Q6TFL3 1326 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 HAS3O00219 553 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 ZNF213O14771 459 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 DHX16O60231 1041 aaKnown RBP8.62□□□□□ -1.03
CSDE1-206ENST00000483030 SORBS3O60504 671 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 LGR5O75473 907 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 F2P00734 622 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 CFBP00751 764 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 HIC1Q14526 733 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 TRIM71Q2Q1W2 868 aaKnown RBP8.62□□□□□ -1.03
CSDE1-206ENST00000483030 QRICH1Q2TAL8 776 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 LEXMQ3ZCV2 418 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 FAM178BQ8IXR5 827 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 GJD3Q8N144 294 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 DBF4BQ8NFT6 615 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 PPTC7Q8NI37 304 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-206ENST00000483030 EMID1Q96A84 441 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-206ENST00000483030 C17orf80Q9BSJ5 609 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 KATNAL1Q9BW62 490 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 MAF1Q9H063 256 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 KAT14Q9H8E8 782 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 JMJD4Q9H9V9 463 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 INSL6Q9Y581 213 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 SCN5AQ14524 2016 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 SCN10AQ9Y5Y9 1956 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 LCTP09848 1927 aa8.62□□□□□ -1.03
CSDE1-206ENST00000483030 REV3LO60673 3130 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 ZMYM6O95789 1325 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 RSPH10B2B2RC85 870 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 B4E1Z4 1266 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 KDM4AO75164 1064 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 PPFIA4O75335 1185 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 PARP1P09874 1014 aaKnown RBP8.61□□□□□ -1.03
CSDE1-206ENST00000483030 RSPH10BP0C881 870 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 MYCLP12524 364 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-206ENST00000483030 IL9P15248 144 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 SSTR3P32745 418 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-206ENST00000483030 THPOP40225 353 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 ASPRV1Q53RT3 343 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 CCDC178Q5BJE1 867 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 MYSM1Q5VVJ2 828 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 PTCRAQ6ISU1 281 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-206ENST00000483030 IQCA1Q86XH1 822 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 TICAM2Q86XR7 235 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 MYOCDQ8IZQ8 938 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 ANKS1AQ92625 1134 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 RILPL2Q969X0 211 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 PXMP2Q9NR77 195 aa8.61□□□□□ -1.03
CSDE1-206ENST00000483030 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 TRANK1O15050 2925 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 GRXCR2A6NFK2 248 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 H3BQ06 376 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 OPLAHO14841 1288 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 RGS20O76081 388 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 GGPS1O95749 300 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 AMHP03971 560 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 HOXD8P13378 290 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 SDSP20132 328 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 HSD17B4P51659 736 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 MFAP1P55081 439 aaKnown RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 SP2Q02086 613 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 HSDL1Q3SXM5 330 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 EPC2Q52LR7 807 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 CELF3Q5SZQ8 465 aaKnown RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 EP400NLQ6ZTU2 488 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 SERINC5Q86VE9 423 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 VSIG10LQ86VR7 867 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 ENAHQ8N8S7 591 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 ATP6V0A1Q93050 837 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 MRPL38Q96DV4 380 aaKnown RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 ZFP91Q96JP5 570 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 SPATA33Q96N06 139 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 UIMC1Q96RL1 719 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-206ENST00000483030 PDCD2LQ9BRP1 358 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 AMNQ9BXJ7 453 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 ZSWIM5Q9P217 1185 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 CTNNA3Q9UI47 895 aa8.6□□□□□ -1.03
CSDE1-206ENST00000483030 EMSYQ7Z589 1322 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 PRR33A8MZF0 331 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 UPP2O95045 317 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 ALADP13716 330 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 HOXA13P31271 388 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-206ENST00000483030 HTRA4P83105 476 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-206ENST00000483030 PTPROQ16827 1216 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 PUS10Q3MIT2 529 aaKnown RBP8.59□□□□□ -1.03
CSDE1-206ENST00000483030 PLEKHG4Q58EX7 1191 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 KCNV1Q6PIU1 500 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
CSDE1-206ENST00000483030 STOX1Q6ZVD7 989 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
CSDE1-206ENST00000483030 PLCD3Q8N3E9 789 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms