RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 DDX49Q9Y6V7 483 aaKnown RBP15.27■□□□□ 0.04
ZKSCAN1-204ENST00000482979 LRRC37A2A6NM11 1700 aa15.27■□□□□ 0.04
ZKSCAN1-204ENST00000482979 LCTP09848 1927 aa15.27■□□□□ 0.03
ZKSCAN1-204ENST00000482979 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 MOXD2PA6NHM9 499 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CTAGE5O15320 804 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 HOXA13P31271 388 aaPredicted RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 MRPL12P52815 198 aaKnown RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FOXD4L6Q3SYB3 417 aaPredicted RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 USP17L6PQ6QN14 398 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FOXD4L3Q6VB84 417 aaPredicted RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 NSMFQ6X4W1 530 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ANKRD33Q7Z3H0 272 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 REXO1Q8N1G1 1221 aaKnown RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CLEC4DQ8WXI8 215 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 GLT8D2Q9H1C3 349 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 UPF3AQ9H1J1 476 aaKnown RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TMEM260Q9NX78 707 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 MYH7BA7E2Y1 1941 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 DLL1O00548 723 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 C6orf222P0C671 652 aaPredicted RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PTGS1P23219 599 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 GJA9P57773 515 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 MCF2L2Q86YR7 1114 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TOX2Q96NM4 488 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FOXP1Q9H334 677 aaPredicted RBP15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TMEM39AQ9NV64 488 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PCDHA6Q9UN73 950 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PCDHA8Q9Y5H6 950 aa15.26■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CCDC194A0A1B0GVG4 234 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FAM205CA6NFA0 338 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ASGR1P07306 291 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 RAG1P15918 1043 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CDK7P50613 346 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ZNF697Q5TEC3 545 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 SLC30A10Q6XR72 485 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PIK3AP1Q6ZUJ8 805 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 NOSTRINQ8IVI9 506 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PURBQ96QR8 312 aaKnown RBP15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TBX21Q9UL17 535 aa15.25■□□□□ 0.03
ZKSCAN1-204ENST00000482979 MEIS2O14770 477 aa15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 U2AF2P26368 475 aaKnown RBP eCLIP15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FAM173BQ6P4H8 233 aa15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 KRT25Q7Z3Z0 450 aa15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 BRAPQ7Z569 592 aa15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 GLT1D1Q96MS3 346 aa15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TTYH1Q9H313 450 aaPredicted RBP15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ZSCAN16Q9H4T2 348 aaPredicted RBP15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TCHHQ07283 1943 aa15.24■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CDH23Q9H251 3354 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ELP1O95163 1332 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 SPDYE3A6NKU9 549 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 DCDC2CA8MYV0 355 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 M0R2N6 131 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CLK2P49760 499 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 HSD17B4P51659 736 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 RPS6P62753 249 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 NKX3-2P78367 333 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 SMAD3P84022 425 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 BEX3Q00994 111 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FPGSQ05932 587 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 BAATQ14032 418 aaPredicted RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 NONOQ15233 471 aaKnown RBP eCLIP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 GNASQ5JWF2 1037 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TMEM63BQ5T3F8 832 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PCSK9Q8NBP7 692 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 RNPC3Q96LT9 517 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CDX2Q99626 313 aaPredicted RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ANO3Q9BYT9 981 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 CYP39A1Q9NYL5 469 aa15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 GNEQ9Y223 722 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ATP2B1P20020 1258 aa15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TNFAIP2Q03169 654 aa15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TNPO1Q92973 898 aaKnown RBP15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 SPC25Q9HBM1 224 aa15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 PDGFCQ9NRA1 345 aa15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 A0A0C4DFX4 3053 aa15.22■□□□□ 0.03
ZKSCAN1-204ENST00000482979 UNC80Q8N2C7 3258 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 A0A0U1RQG5 324 aaPredicted RBP15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ASB14A6NK59 587 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 ARVCFO00192 962 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TIMP1P01033 207 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 FOSP01100 380 aaPredicted RBP15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 SMPD1P17405 629 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 INF2Q27J81 1249 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 MYSM1Q5VVJ2 828 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 TAPT1Q6NXT6 567 aa15.21■□□□□ 0.03
ZKSCAN1-204ENST00000482979 EEPD1Q7L9B9 569 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms