RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 LARGE1O95461 756 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 ITGB5P18084 799 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 CPT1AP50416 773 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 MRPL12P52815 198 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 PFKFB3Q16875 520 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 CELF3Q5SZQ8 465 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 C16orf59Q7L2K0 433 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 RASGRP4Q8TDF6 673 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 INPP4AQ96PE3 977 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 SLC26A6Q9BXS9 759 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 TM6SF1Q9BZW5 370 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 RIC8AQ9NPQ8 531 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 TPCN1Q9ULQ1 816 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 CHD9Q3L8U1 2897 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 COL6A3P12111 3177 aa13.11□□□□□ -0.31
RAPGEF1-207ENST00000481260 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 DCDC2CA8MYV0 355 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 SPATA31C2B4DYI2 1134 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 ZEB2O60315 1214 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 ACRP10323 421 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 SCG2P13521 617 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 RAG1P15918 1043 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 RCAN1P53805 252 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 ZNF200P98182 395 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 SP4Q02446 784 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 TRAF1Q13077 416 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 FAM47CQ5HY64 1035 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 PCNX4Q63HM2 1172 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 TDHQ8IZJ6 230 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 SAMD3Q8N6K7 520 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 CUL5Q93034 780 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 SCN10AQ9Y5Y9 1956 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 DOCK5Q9H7D0 1870 aa13.1□□□□□ -0.31
RAPGEF1-207ENST00000481260 EYSQ5T1H1 3165 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 PRPF3O43395 683 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 EDIL3O43854 480 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 CABYRO75952 493 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 TIMP1P01033 207 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 CSF2RAP15509 400 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 CLK2P49760 499 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 ADCY7P51828 1080 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 AK2P54819 239 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 CCL23P55773 120 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 SCRN1Q12765 414 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 GDF6Q6KF10 455 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 CYFIP1Q7L576 1253 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 WNT8BQ93098 351 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 SPATA33Q96N06 139 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 ALG1Q9BT22 464 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 GJB4Q9NTQ9 266 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 VPS54Q9P1Q0 977 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
RAPGEF1-207ENST00000481260 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 KCNA2P16389 499 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 IFNAR1P17181 557 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 ICAM3P32942 547 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 ST3GAL1Q11201 340 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 Q7L0L9 218 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 DHX38Q92620 1227 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 SCLYQ96I15 445 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 C16orf70Q9BSU1 422 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 ANO3Q9BYT9 981 aa13.08□□□□□ -0.32
RAPGEF1-207ENST00000481260 ARP10275 920 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 PSEN2P49810 448 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 MFSD10Q14728 455 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 IL17RAQ96F46 866 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 KIF2CQ99661 725 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 GPR20Q99678 358 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 MLXIPQ9HAP2 919 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 HDAC6Q9UBN7 1215 aa13.07□□□□□ -0.32
RAPGEF1-207ENST00000481260 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 MYH7BA7E2Y1 1941 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 SPDYE3A6NKU9 549 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 HAS3O00219 553 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 FIBPO43427 364 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 F2P00734 622 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 LGALS2P05162 132 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 FPGSQ05932 587 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 NPY5RQ15761 445 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms