RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RBL2Q08999 1139 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 METTL7BQ6UX53 244 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 ZNF365Q70YC5 407 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 SLC17A8Q8NDX2 589 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 PHOSPHO2Q8TCD6 241 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
CCM2-213ENST00000480658 SLC9A7Q96T83 725 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 SLC4A7Q9Y6M7 1214 aa13.17□□□□□ -0.3
CCM2-213ENST00000480658 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 ZBTB43O43298 467 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 GGPS1O95749 300 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 PSMA5P28066 241 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 MFSD10Q14728 455 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
CCM2-213ENST00000480658 COPS5Q92905 334 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 WNT8AQ9H1J5 351 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
CCM2-213ENST00000480658 FOSP01100 380 aaPredicted RBP13.15□□□□□ -0.3
CCM2-213ENST00000480658 FOSL2P15408 326 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 PSEN2P49810 448 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 CCL23P55773 120 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 PTK7Q13308 1070 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 RTN1Q16799 776 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 KIAA0753Q2KHM9 967 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 GAS2L1Q99501 681 aaPredicted RBP13.15□□□□□ -0.3
CCM2-213ENST00000480658 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
CCM2-213ENST00000480658 MYL10Q9BUA6 226 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
CCM2-213ENST00000480658 ZBBXA8MT70 800 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 SPATA31C2B4DYI2 1134 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 RGS20O76081 388 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 IQCF3P0C7M6 154 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 ACRP10323 421 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 CYP2C9P11712 490 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 SELPP16109 830 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 KCNJ6P48051 423 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 C16orf59Q7L2K0 433 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 HEATR3Q7Z4Q2 680 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
CCM2-213ENST00000480658 ZNF576Q9H609 170 aa13.14□□□□□ -0.31
CCM2-213ENST00000480658 H3BRB1 525 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 HAS3O00219 553 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 MEIS2O14770 477 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 PLEKHA8P1O95397 391 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 ZNF286BP0CG31 522 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
CCM2-213ENST00000480658 PTGS1P23219 599 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
CCM2-213ENST00000480658 MTMR1Q13613 665 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 HSDL1Q3SXM5 330 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
CCM2-213ENST00000480658 LRRC8DQ7L1W4 858 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 KAT2BQ92831 832 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 FAM161BQ96MY7 647 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 PBX4Q9BYU1 374 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 FTOQ9C0B1 505 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCM2-213ENST00000480658 TUT1Q9H6E5 874 aaKnown RBP13.13□□□□□ -0.31
CCM2-213ENST00000480658 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
CCM2-213ENST00000480658 NID2Q14112 1375 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 C17orf102A2RUQ5 167 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 HSPA4P34932 840 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 METAP2P50579 478 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCM2-213ENST00000480658 NAPAP54920 295 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 MRPS9P82933 396 aaKnown RBP13.12□□□□□ -0.31
CCM2-213ENST00000480658 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
CCM2-213ENST00000480658 CNKSR3Q6P9H4 555 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 MAFAQ8NHW3 353 aaPredicted RBP13.12□□□□□ -0.31
CCM2-213ENST00000480658 IL31RAQ8NI17 732 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 KCNB2Q92953 911 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 SCLYQ96I15 445 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 TTYH1Q9H313 450 aaPredicted RBP13.12□□□□□ -0.31
CCM2-213ENST00000480658 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 NRCAMQ92823 1304 aa13.12□□□□□ -0.31
CCM2-213ENST00000480658 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
CCM2-213ENST00000480658 ABHD14A-ACY1A0A1B0GW23 586 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms