RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 NPIPB6E9PJ23 425 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 PLD2O14939 933 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 TADA3O75528 432 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 GNAT1P11488 350 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 PI3P19957 117 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 PAK1Q13153 545 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 SSPNQ14714 243 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 BRAPQ7Z569 592 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 MIB1Q86YT6 1006 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 CILP2Q8IUL8 1156 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 TMEFF1Q8IYR6 380 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 KCNJ15Q99712 375 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 KRTAP9-2Q9BYQ4 174 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 SLC6A20Q9NP91 592 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 PCDHB4Q9Y5E5 795 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 PCDHA9Q9Y5H5 950 aa7.73□□□□□ -1.17
CALD1-219ENST00000480638 MRPL42Q9Y6G3 142 aaKnown RBP7.73□□□□□ -1.17
CALD1-219ENST00000480638 KRIT1O00522 736 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 WNT9AO14904 365 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 KCNQ2O43526 872 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 ATF2P15336 505 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 HABP4Q5JVS0 413 aaKnown RBP7.72□□□□□ -1.17
CALD1-219ENST00000480638 CYP4F22Q6NT55 531 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 ETV3LQ6ZN32 361 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 NOP9Q86U38 636 aaKnown RBP7.72□□□□□ -1.17
CALD1-219ENST00000480638 CPA5Q8WXQ8 436 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 TRIM39Q9HCM9 518 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 MYOTQ9UBF9 498 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 CNOT6Q9ULM6 557 aaKnown RBP7.72□□□□□ -1.17
CALD1-219ENST00000480638 KCTD3Q9Y597 815 aa7.72□□□□□ -1.17
CALD1-219ENST00000480638 TCRBV5S2A0A599 114 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 DBX1A6NMT0 343 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 MAFKO60675 156 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 IGSF3O75054 1194 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 RASGRP1O95267 797 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 RAPGEF3O95398 923 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 SPIRE1Q08AE8 756 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 PCDH19Q8TAB3 1148 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 UHMK1Q8TAS1 419 aaKnown RBP7.71□□□□□ -1.18
CALD1-219ENST00000480638 PHOSPHO1Q8TCT1 267 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 SCLYQ96I15 445 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 SMOC1Q9H4F8 434 aa7.71□□□□□ -1.18
CALD1-219ENST00000480638 EPB41L4AQ9HCS5 686 aaPredicted RBP7.71□□□□□ -1.18
CALD1-219ENST00000480638 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.7□□□□□ -1.18
CALD1-219ENST00000480638 RFXAPO00287 272 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 PPP1R12AO14974 1030 aaPredicted RBP7.7□□□□□ -1.18
CALD1-219ENST00000480638 ASMTLO95671 621 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 COL6A2P12110 1019 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 YBX3P16989 372 aaKnown RBP eCLIP7.7□□□□□ -1.18
CALD1-219ENST00000480638 LIMS1P48059 325 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 CACNB2Q08289 660 aaPredicted RBP7.7□□□□□ -1.18
CALD1-219ENST00000480638 FNDC3BQ53EP0 1204 aaKnown RBP7.7□□□□□ -1.18
CALD1-219ENST00000480638 FGD2Q7Z6J4 655 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 HOMER1Q86YM7 354 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 ZC3H7AQ8IWR0 971 aaKnown RBP7.7□□□□□ -1.18
CALD1-219ENST00000480638 FAM126BQ8IXS8 530 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 ARRDC4Q8NCT1 418 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 CLUHP3Q96NS8 147 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 FANCLQ9NW38 375 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 ASH2LQ9UBL3 628 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 FAN1Q9Y2M0 1017 aa7.7□□□□□ -1.18
CALD1-219ENST00000480638 SLC27A2O14975 620 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 NKRFO15226 690 aaKnown RBP eCLIP7.69□□□□□ -1.18
CALD1-219ENST00000480638 C8BP07358 591 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 SRGAP2CP0DJJ0 459 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 B3GNT8Q7Z7M8 397 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 FAM129CQ86XR2 697 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 SMARCC2Q8TAQ2 1214 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 APPBP2Q92624 585 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 FBXW5Q969U6 566 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 MAGEB10Q96LZ2 347 aaPredicted RBP7.69□□□□□ -1.18
CALD1-219ENST00000480638 TOX2Q96NM4 488 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 TBX22Q9Y458 520 aa7.69□□□□□ -1.18
CALD1-219ENST00000480638 TCRBV16S1A1N1A0A5B0 115 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 NUAK1O60285 661 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 PYGMP11217 842 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 FOXO4P98177 505 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 ZNF385BQ569K4 471 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 SYNPOQ8N3V7 929 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 PANK1Q8TE04 598 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 DTLQ9NZJ0 730 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 CBLCQ9ULV8 474 aa7.68□□□□□ -1.18
CALD1-219ENST00000480638 KRTAP9-6A0A140TA67 174 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 TCRBV5S4A2TA0A5A2 114 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 CCDC66A2RUB6 948 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 CDC45O75419 566 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
CALD1-219ENST00000480638 APPP05067 770 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 CFPP27918 469 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 ST5P78524 1137 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 TCEA2Q15560 299 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 FAM47CQ5HY64 1035 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 CIAPIN1Q6FI81 312 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 CNKSR3Q6P9H4 555 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 C16orf59Q7L2K0 433 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 C1QL4Q86Z23 238 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 LRRC56Q8IYG6 542 aaPredicted RBP7.67□□□□□ -1.18
CALD1-219ENST00000480638 FAM26EQ8N5C1 309 aa7.67□□□□□ -1.18
CALD1-219ENST00000480638 TTLL11Q8NHH1 800 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms