RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 ATP1A2P50993 1020 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 CUL1Q13616 776 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 DESI2Q9BSY9 194 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 PPME1Q9Y570 386 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 TTLL1O95922 423 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 CCND2P30279 289 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 RNF139Q8WU17 664 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 SUCLG2Q96I99 432 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 TRIM45Q9H8W5 580 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-212ENST00000480614 CDC23Q9UJX2 597 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 PSMC2P35998 433 aaKnown RBP10.31□□□□□ -0.76
VEGFA-212ENST00000480614 GUCY2DQ02846 1103 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 IFNL3Q8IZI9 196 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
VEGFA-212ENST00000480614 EIF3BP55884 814 aaKnown RBP10.31□□□□□ -0.76
VEGFA-212ENST00000480614 PTGDRQ13258 359 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 TAF1BQ53T94 588 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-212ENST00000480614 DNAAF3Q8N9W5 541 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 KCTD6Q8NC69 237 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 TUBGCP2Q9BSJ2 902 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 BRD1O95696 1058 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 CCDC127Q96BQ5 260 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 VPS39Q96JC1 886 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 LMCD1Q9NZU5 365 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 PRPSAP2O60256 369 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 FBLN1P23142 703 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 CIITAP33076 1130 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 FKBP3Q00688 224 aaKnown RBP10.31□□□□□ -0.76
VEGFA-212ENST00000480614 KAZNQ674X7 775 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 KIAA1841Q6NSI8 718 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-212ENST00000480614 TAC1P20366 129 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 KRT80Q6KB66 452 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 SCYL3Q8IZE3 742 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 SIX6OS1Q8N1H7 587 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 EEF1DP29692 281 aaKnown RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 SNX1Q13596 522 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 MAN2A1Q16706 1144 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 DPP9Q86TI2 863 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 ATP5HO75947 161 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 MTBPQ96DY7 904 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 PNMA3Q9UL41 463 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 TAF5LO75529 589 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 DRP2Q13474 957 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 THOC5Q13769 683 aaKnown RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 SGO2Q562F6 1265 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 BCAS4Q8TDM0 211 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 ZNF653Q96CK0 615 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 ATP10AO60312 1499 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 MAP2P11137 1827 aaKnown RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 TNKSO95271 1327 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 LRRC4Q9HBW1 653 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 POLR3EQ9NVU0 708 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 EEF1B2P24534 225 aaKnown RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 ZBTB38Q8NAP3 1195 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 FAM96AQ9H5X1 160 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 AKT3Q9Y243 479 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 POLR2FP61218 127 aaKnown RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 UBE3CQ15386 1083 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 ARMCX2Q7L311 632 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 MYL10Q9BUA6 226 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 KIAA1024Q9UPX6 916 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 USP19O94966 1318 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 GOLGA8FQ08AF8 430 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 GOLGA8DPQ0D2H9 430 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 XDHP47989 1333 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 IQANK1A0A1B0GTG1 560 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 NR2F2P24468 414 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 EAPPQ56P03 285 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 SESTD1Q86VW0 696 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 LAMC1P11047 1609 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 KIF1CO43896 1103 aaKnown RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 ZAP70P43403 619 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 SPOPLQ6IQ16 392 aa10.3□□□□□ -0.76
VEGFA-212ENST00000480614 ACTR5Q9H9F9 607 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-212ENST00000480614 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 CARMIL3Q8ND23 1372 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 ECM2O94769 699 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-212ENST00000480614 MT-ND3P03897 115 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 LARP4BQ92615 738 aaKnown RBP10.29□□□□□ -0.76
VEGFA-212ENST00000480614 FAM149B1Q96BN6 582 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 PGBD1Q96JS3 809 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 FRMPD2Q68DX3 1309 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-212ENST00000480614 ME3Q16798 604 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 FAM47AQ5JRC9 791 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 LRRC43Q8N309 656 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 GJA10Q969M2 543 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 ZSWIM6Q9HCJ5 1215 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 TRIM33Q9UPN9 1127 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 LRRC8AQ8IWT6 810 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 CNOT6LQ96LI5 555 aaKnown RBP10.29□□□□□ -0.76
VEGFA-212ENST00000480614 hCG_1642624A0A1W2PR95 340 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms