RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ARHGAP1Q07960 439 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 MTMR1Q13613 665 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 FSCN1Q16658 493 aaKnown RBP17.26■□□□□ 0.35
ABCF3-213ENST00000480539 KRT25Q7Z3Z0 450 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 NECAB2Q7Z6G3 386 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 DIS3L2Q8IYB7 885 aaKnown RBP17.26■□□□□ 0.35
ABCF3-213ENST00000480539 KLHDC9Q8NEP7 349 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 CYP2W1Q8TAV3 490 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 CRYGNQ8WXF5 182 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 GPRASP2Q96D09 838 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 CCDC194A0A1B0GVG4 234 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 FAM205CA6NFA0 338 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 SPATA31C2B4DYI2 1134 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 FAM86B1E9PN63 330 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 FAM86B2P0C5J1 330 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 CAPN2P17655 700 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 ICAM3P32942 547 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 CUL4AQ13619 759 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 NONOQ15233 471 aaKnown RBP eCLIP17.25■□□□□ 0.35
ABCF3-213ENST00000480539 KCNA10Q16322 511 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 CEP55Q53EZ4 464 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 GNASQ5JWF2 1037 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 KCNV1Q6PIU1 500 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 MXRA8Q9BRK3 442 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 Q9Y3F1 56 aa17.25■□□□□ 0.35
ABCF3-213ENST00000480539 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-213ENST00000480539 A0A1W2PQ45 241 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-213ENST00000480539 A0A1W2PQY0 241 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 ASGR1P07306 291 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 CYP3A4P08684 503 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 COL6A1P12109 1028 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 INF2Q27J81 1249 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 EARS2Q5JPH6 523 aaKnown RBP17.24■□□□□ 0.35
ABCF3-213ENST00000480539 CCSAPQ6IQ19 270 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-213ENST00000480539 PIK3AP1Q6ZUJ8 805 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
ABCF3-213ENST00000480539 AFG1LQ8WV93 481 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 SNX21Q969T3 373 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 SENP6Q9GZR1 1112 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-213ENST00000480539 BCAS3Q9H6U6 928 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 JADE2Q9NQC1 790 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 PHF24Q9UPV7 400 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 DOCK5Q9H7D0 1870 aa17.24■□□□□ 0.35
ABCF3-213ENST00000480539 MKI67P46013 3256 aaKnown RBP17.23■□□□□ 0.35
ABCF3-213ENST00000480539 BTBD18B2RXH4 712 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 MMP3P08254 477 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 MYL3P08590 195 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 ARP10275 920 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 TGFB3P10600 412 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 RGS19P49795 217 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 CPT1AP50416 773 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 ACLYP53396 1101 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 ATN1P54259 1190 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-213ENST00000480539 NKX3-2P78367 333 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 SP4Q02446 784 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 CELF3Q5SZQ8 465 aaKnown RBP17.23■□□□□ 0.35
ABCF3-213ENST00000480539 CYFIP1Q7L576 1253 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 PCSK9Q8NBP7 692 aaKnown RBP17.23■□□□□ 0.35
ABCF3-213ENST00000480539 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 CDHR1Q96JP9 859 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 UIMC1Q96RL1 719 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 KCNH7Q9NS40 1196 aa17.23■□□□□ 0.35
ABCF3-213ENST00000480539 IGLV3-22A0A075B6J6 115 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 MOXD2PA6NHM9 499 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 EDIL3O43854 480 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 ATP9AO75110 1047 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 TDP2O95551 362 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 KCNA2P16389 499 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
ABCF3-213ENST00000480539 PRR16Q569H4 304 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 MYSM1Q5VVJ2 828 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 CXCL17Q6UXB2 119 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 FBXO18Q8NFZ0 1043 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 EMID1Q96A84 441 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-213ENST00000480539 SPATA33Q96N06 139 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 TSEN34Q9BSV6 310 aaKnown RBP17.22■□□□□ 0.35
ABCF3-213ENST00000480539 MLXIPQ9HAP2 919 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 TELO2Q9Y4R8 837 aa17.22■□□□□ 0.35
ABCF3-213ENST00000480539 A6NJR5 290 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 MEIS1O00470 390 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 ZEB2O60315 1214 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-213ENST00000480539 LAMC2Q13753 1193 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.35
ABCF3-213ENST00000480539 NEDD9Q14511 834 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 LRRC26Q2I0M4 334 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 LETM2Q2VYF4 491 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-213ENST00000480539 NIPA1Q7RTP0 329 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 PPTC7Q8NI37 304 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 LENG9Q96B70 501 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 AGO4Q9HCK5 861 aaKnown RBP17.21■□□□□ 0.35
ABCF3-213ENST00000480539 STARD7Q9NQZ5 370 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms