RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CCDC22O60826 627 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 MXI1P50539 228 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 PPP2R2AP63151 447 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 ANO5Q75V66 913 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 SIRT2Q8IXJ6 389 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 SYT2Q8N9I0 419 aaPredicted RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 PI4K2BQ8TCG2 481 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 NGLY1Q96IV0 654 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 EPSTI1Q96J88 318 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 CCSER1Q9C0I3 900 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 ANAPC5Q9UJX4 755 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 NOVA2Q9UNW9 492 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 STK38LQ9Y2H1 464 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 CDK12Q9NYV4 1490 aaPredicted RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 USP42Q9H9J4 1324 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 KIAA0391O15091 583 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 CDH16O75309 829 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 PRLRP16471 622 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 SCP2P22307 547 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 ATP2B4P23634 1241 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 RNASE9P60153 205 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 DR1Q01658 176 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 SGO2Q562F6 1265 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 KRT80Q6KB66 452 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 DEPTORQ8TB45 409 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 PLIN2Q99541 437 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 PITPNM3Q9BZ71 974 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 KANSL2Q9H9L4 492 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 SERPINA10Q9UK55 444 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 ANGPTL3Q9Y5C1 460 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 MAGI2Q86UL8 1455 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 RASSF7Q02833 373 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 IQCB1Q15051 598 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 NUGGCQ68CJ6 796 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 WDR93Q6P2C0 686 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 TAF1DQ9H5J8 278 aaPredicted RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 NHEJ1Q9H9Q4 299 aaPredicted RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 LIMA1Q9UHB6 759 aaKnown RBP6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 ATP8A1Q9Y2Q0 1164 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 CLIC4Q9Y696 253 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 TMEM2Q9UHN6 1383 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 ARHGEF5Q12774 1597 aa6.65□□□□□ -1.34
PRPF4B-205ENST00000480058 SRGAP2BP0DMP2 458 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ADD2P35612 726 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 PSMD7P51665 324 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 STAT4Q14765 748 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 PCGF5Q86SE9 256 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ANKRD13CQ8N6S4 541 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 TEKT3Q9BXF9 490 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ROPN1BQ9BZX4 212 aaPredicted RBP6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 BLZF1Q9H2G9 400 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ROPN1Q9HAT0 212 aaPredicted RBP6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ERVK-7P63135 1459 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 EXOC1LA0A1B0GW35 172 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 RASSF10A6NK89 507 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 TNNC2P02585 160 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 TNNI1P19237 187 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 CTSWP56202 376 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 CAPRIN2Q6IMN6 1127 aaKnown RBP6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ARMCX5Q6P1M9 558 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 N4BP2L2Q92802 583 aaPredicted RBP6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 DISC1Q9NRI5 854 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 EMILIN3Q9NT22 766 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 HACD3Q9P035 362 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ABCB4P21439 1286 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 FBLN1P23142 703 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 CHRNA2Q15822 529 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 FIGNQ5HY92 759 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 AGBL2Q5U5Z8 902 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 CC2D2BQ6DHV5 1058 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 TRIM72Q6ZMU5 477 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 FLAD1Q8NFF5 587 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 JARID2Q92833 1246 aaPredicted RBP6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM20AQ96MK3 541 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 ADPGKQ9BRR6 497 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 DHX36Q9H2U1 1008 aaKnown RBP6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 NRBP2Q9NSY0 501 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 PCDHA13Q9Y5I0 950 aa6.65□□□□□ -1.35
PRPF4B-205ENST00000480058 MBD5Q9P267 1494 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 F8W8V4 182 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ODR4Q5SWX8 454 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 KCTD16Q68DU8 428 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 TRMT10CQ7L0Y3 403 aaKnown RBP6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 PPM1KQ8N3J5 372 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 STAMQ92783 540 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ACCSQ96QU6 501 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ABHD10Q9NUJ1 306 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 MAST1Q9Y2H9 1570 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ZNF233A6NK53 670 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 SPAG7O75391 227 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 SPAG6O75602 509 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ZRANB2O95218 330 aaKnown RBP eCLIP6.64□□□□□ -1.352e-11■■□□□ 14
PRPF4B-205ENST00000480058 PHEXP78562 749 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 ARHGAP44Q17R89 818 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 FBXO11Q86XK2 927 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 HPS3Q969F9 1004 aa6.64□□□□□ -1.35
PRPF4B-205ENST00000480058 KIF9Q9HAQ2 790 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms