RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 ORC2Q13416 577 aaPredicted RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 KCNB1Q14721 858 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 KRT31Q15323 416 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 TCP11X2Q5H9J9 407 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 ANKRD40Q6AI12 368 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 TRMT1LQ7Z2T5 733 aaKnown RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 CSGALNACT2Q8N6G5 542 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 KIAA0895Q8NCT3 520 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 TSC1Q92574 1164 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 ZNF592Q92610 1267 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 WNK4Q96J92 1243 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 PURBQ96QR8 312 aaKnown RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 C7orf25Q9BPX7 421 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 CUEDC2Q9H467 287 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 SH2D4AQ9H788 454 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 RAVER2Q9HCJ3 691 aaKnown RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 EMILIN3Q9NT22 766 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 EXOC1Q9NV70 894 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 GGA3Q9NZ52 723 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 GPRC5DQ9NZD1 345 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 CCPG1Q9ULG6 757 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 SYNPO2Q9UMS6 1093 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 POLR2AP24928 1970 aaKnown RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 FER1L6Q2WGJ9 1857 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 COL2A1P02458 1487 aaPredicted RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 IGLV3-22A0A075B6J6 115 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 KCNJ18B7U540 433 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 RNF225M0QZC1 329 aaPredicted RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 PIK3CDO00329 1044 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 EML1O00423 815 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 CHMP2AO43633 222 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 MYL1P05976 194 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 SPATA31C1P0DKV0 1188 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 ALAS1P13196 640 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 VCAM1P19320 739 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 MMP14P50281 582 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 HMGCS2P54868 508 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 PABPC4Q13310 644 aaKnown RBP eCLIP4.61□□□□□ -1.673e-16■■■■□ 26.7
USP25-208ENST00000478932 KCNJ12Q14500 433 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 E4F1Q66K89 784 aaPredicted RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 NCAPH2Q6IBW4 605 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 TTI2Q6NXR4 508 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 TC2NQ8N9U0 490 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 PIGOQ8TEQ8 1089 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 RAD54LQ92698 747 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 TRIM47Q96LD4 638 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 KIAA1683Q9H0B3 1180 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 RANBP17Q9H2T7 1088 aaKnown RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 ZHX3Q9H4I2 956 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 BCAS3Q9H6U6 928 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 SPON1Q9HCB6 807 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 BMP2KQ9NSY1 1161 aaPredicted RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 TAB2Q9NYJ8 693 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 PKD2L1Q9P0L9 805 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 COL20A1Q9P218 1284 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 STK17AQ9UEE5 414 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 FEM1BQ9UK73 627 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 ZNF536O15090 1300 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 KIF13BQ9NQT8 1826 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 SFI1A8K8P3 1242 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 PEX10O60683 326 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 TNNT1P13805 278 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 ITGB5P18084 799 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 PTPRAP18433 802 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 LMNB1P20700 586 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 CASP14P31944 242 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 FXR1P51114 621 aaKnown RBP eCLIP4.6□□□□□ -1.67
USP25-208ENST00000478932 ATN1P54259 1190 aaPredicted RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 BACE1P56817 501 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 RBL2Q08999 1139 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 TBX2Q13207 712 aaPredicted RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 STIM1Q13586 685 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 ARSHQ5FYA8 562 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 MUM1L1Q5H9M0 696 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 CT47A1Q5JQC4 288 aaPredicted RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 SLFN12Q8IYM2 578 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 CCAR2Q8N163 923 aaKnown RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 PLCD3Q8N3E9 789 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 DNAJC19Q96DA6 116 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 HOOK2Q96ED9 719 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 MBOAT7Q96N66 472 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 DUSP9Q99956 384 aaKnown RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 SLF1Q9BQI6 1058 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 WDR18Q9BV38 432 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 FGFBP2Q9BYJ0 223 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 SEMA6BQ9H3T3 888 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 RIPK3Q9Y572 518 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 MKI67P46013 3256 aaKnown RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 LTBP3Q9NS15 1303 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 HTTP42858 3142 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 PSME4Q14997 1843 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 MAP3K13O43283 966 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 ICAM1P05362 532 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 PLA2G4BP0C869 781 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 ARP10275 920 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 PRKCSHP14314 528 aaPredicted RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 RPA1P27694 616 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 CIITAP33076 1130 aa4.6□□□□□ -1.67
USP25-208ENST00000478932 RPS6P62753 249 aaKnown RBP4.6□□□□□ -1.67
USP25-208ENST00000478932 UBXN1Q04323 297 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms