RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 HIPK3Q9H422 1215 aa18.4■□□□□ 0.54
CYTH3-206ENST00000478541 ZSWIM6Q9HCJ5 1215 aa18.4■□□□□ 0.54
CYTH3-206ENST00000478541 V9GY48 417 aaPredicted RBP18.4■□□□□ 0.54
CYTH3-206ENST00000478541 DOCK5Q9H7D0 1870 aa18.39■□□□□ 0.54
CYTH3-206ENST00000478541 SPATA31C2B4DYI2 1134 aa18.39■□□□□ 0.53
CYTH3-206ENST00000478541 FIBPO43427 364 aa18.39■□□□□ 0.53
CYTH3-206ENST00000478541 PPFIA4O75335 1185 aa18.39■□□□□ 0.53
CYTH3-206ENST00000478541 ADD1P35611 737 aaKnown RBP18.39■□□□□ 0.53
CYTH3-206ENST00000478541 SESTD1Q86VW0 696 aa18.39■□□□□ 0.53
CYTH3-206ENST00000478541 ZFP91Q96JP5 570 aaPredicted RBP18.39■□□□□ 0.53
CYTH3-206ENST00000478541 TRMT13Q9NUP7 481 aaKnown RBP18.39■□□□□ 0.53
CYTH3-206ENST00000478541 BARHL2Q9NY43 387 aa18.39■□□□□ 0.53
CYTH3-206ENST00000478541 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 F2P00734 622 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 CSF2RAP15509 400 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 CYP2C18P33260 490 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 NAPAP54920 295 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 SEMA3FQ13275 785 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 NEDD9Q14511 834 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 HSDL1Q3SXM5 330 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 TYW1BQ6NUM6 668 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 SPATA33Q96N06 139 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 SENP7Q9BQF6 1050 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 KATNAL1Q9BW62 490 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 RIC8AQ9NPQ8 531 aa18.38■□□□□ 0.53
CYTH3-206ENST00000478541 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
CYTH3-206ENST00000478541 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 STXBP3O00186 592 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 HAS3O00219 553 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 UBE2SQ16763 222 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 PFKFB3Q16875 520 aaPredicted RBP18.37■□□□□ 0.53
CYTH3-206ENST00000478541 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 C16orf59Q7L2K0 433 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 NLRX1Q86UT6 975 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 GPRASP2Q96D09 838 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 GLT8D2Q9H1C3 349 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 MLXIPQ9HAP2 919 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 RTEL1Q9NZ71 1219 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 PCDHA6Q9UN73 950 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 PCDHA8Q9Y5H6 950 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 CYP46A1Q9Y6A2 500 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 UMODL1Q5DID0 1318 aa18.37■□□□□ 0.53
CYTH3-206ENST00000478541 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
CYTH3-206ENST00000478541 NTRK3Q16288 839 aa18.36■□□□□ 0.53
CYTH3-206ENST00000478541 PSRC1Q6PGN9 363 aaPredicted RBP18.36■□□□□ 0.53
CYTH3-206ENST00000478541 METTL7BQ6UX53 244 aa18.36■□□□□ 0.53
CYTH3-206ENST00000478541 CDHR1Q96JP9 859 aa18.36■□□□□ 0.53
CYTH3-206ENST00000478541 RNPC3Q96LT9 517 aaKnown RBP18.36■□□□□ 0.53
CYTH3-206ENST00000478541 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.53
CYTH3-206ENST00000478541 WNT8AQ9H1J5 351 aa18.36■□□□□ 0.53
CYTH3-206ENST00000478541 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
CYTH3-206ENST00000478541 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
CYTH3-206ENST00000478541 SMCO2A6NFE2 343 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 PITPNM1O00562 1244 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 PRPF3O43395 683 aaKnown RBP18.35■□□□□ 0.53
CYTH3-206ENST00000478541 FOSP01100 380 aaPredicted RBP18.35■□□□□ 0.53
CYTH3-206ENST00000478541 CYP2C9P11712 490 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 SCG2P13521 617 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 PDIA3P30101 505 aaKnown RBP18.35■□□□□ 0.53
CYTH3-206ENST00000478541 PSEN2P49810 448 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 ADCY7P51828 1080 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 SMAD3P84022 425 aaKnown RBP18.35■□□□□ 0.53
CYTH3-206ENST00000478541 TMEM240Q5SV17 173 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 FAM109BQ6ICB4 259 aaPredicted RBP18.35■□□□□ 0.53
CYTH3-206ENST00000478541 GIMAP8Q8ND71 665 aaPredicted RBP18.35■□□□□ 0.53
CYTH3-206ENST00000478541 C16orf70Q9BSU1 422 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 GTF2IRD1Q9UHL9 959 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 UBIAD1Q9Y5Z9 338 aa18.35■□□□□ 0.53
CYTH3-206ENST00000478541 MAFGO15525 162 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 ZNF286BP0CG31 522 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 IFNAR1P17181 557 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 ITGB5P18084 799 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 CLK2P49760 499 aaKnown RBP18.34■□□□□ 0.53
CYTH3-206ENST00000478541 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 MFSD10Q14728 455 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 PTGISQ16647 500 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 KIAA0753Q2KHM9 967 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 RASIP1Q5U651 963 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 CYFIP1Q7L576 1253 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 PPP1R13LQ8WUF5 828 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 CTAGE1Q96RT6 745 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 RNF26Q9BY78 433 aaPredicted RBP18.34■□□□□ 0.53
CYTH3-206ENST00000478541 BCAS3Q9H6U6 928 aa18.34■□□□□ 0.53
CYTH3-206ENST00000478541 ESYT2A0FGR8 921 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 NOP56O00567 594 aaKnown RBP18.33■□□□□ 0.52
CYTH3-206ENST00000478541 SORBS3O60504 671 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
CYTH3-206ENST00000478541 CCL23P55773 120 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 ANAPC15P60006 121 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 PKN1Q16512 942 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 GDF6Q6KF10 455 aaPredicted RBP18.33■□□□□ 0.52
CYTH3-206ENST00000478541 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 RPUSD2Q8IZ73 545 aaKnown RBP18.33■□□□□ 0.52
CYTH3-206ENST00000478541 DEFB123Q8N688 67 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 C7orf31Q8N865 590 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 CCDC12Q8WUD4 166 aaPredicted RBP18.33■□□□□ 0.52
CYTH3-206ENST00000478541 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
CYTH3-206ENST00000478541 HDAC6Q9UBN7 1215 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 NOD1Q9Y239 953 aa18.33■□□□□ 0.52
CYTH3-206ENST00000478541 SCN5AQ14524 2016 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms