RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 PRPF38AQ8NAV1 312 aaKnown RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 LENG9Q96B70 501 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 DNAJC19Q96DA6 116 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CNOT6LQ96LI5 555 aaKnown RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FEZ1Q99689 392 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 POLR3CQ9BUI4 534 aaPredicted RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 DNM3Q9UQ16 869 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 NFKBIEO00221 500 aa13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FIGNQ5HY92 759 aa13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KRT26Q7Z3Y9 468 aa13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 MYOCDQ8IZQ8 938 aa13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KIAA1683Q9H0B3 1180 aa13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ABHD10Q9NUJ1 306 aa13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PANK4Q9NVE7 773 aa13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 LUC7L2Q9Y383 392 aaKnown RBP13.88□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FAM86B1E9PN63 330 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CFBP00751 764 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ICAM1P05362 532 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FAM86B2P0C5J1 330 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 MTIF2P46199 727 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 USP14P54578 494 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SNAP25P60880 206 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 COASYQ13057 564 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 DCAF15Q66K64 600 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 MCF2L2Q86YR7 1114 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FRMD3A2A2Y4 597 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FZD9O00144 591 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 MSH4O15457 936 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 GNA14O95837 355 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PTGER2P43116 358 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FKBP3Q00688 224 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ECM1Q16610 540 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PTPN21Q16825 1174 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KIAA1755Q5JYT7 1200 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CATSPER3Q86XQ3 398 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SYT2Q8N9I0 419 aaPredicted RBP13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 OR8K1Q8NGG5 319 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CPLX3Q8WVH0 158 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ERGIC2Q96RQ1 377 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 P2RX7Q99572 595 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 L2HGDHQ9H9P8 463 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CAPN11Q9UMQ6 739 aa13.87□□□□□ -0.19
TRAF3IP3-213ENST00000478359 IGLV3-22A0A075B6J6 115 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 POTEB3A0JP26 581 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 POTECB2RU33 542 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 E9PMD0 336 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 COBLO75128 1261 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KRT18P05783 430 aaKnown RBP13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KRT9P35527 623 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 GHRHRQ02643 423 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 GOLGA8FQ08AF8 430 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 GOLGA8DPQ0D2H9 430 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 TBC1D8BQ0IIM8 1120 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 MAN2A1Q16706 1144 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 NCAPH2Q6IBW4 605 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 POTEBQ6S5H4 581 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SYT10Q6XYQ8 523 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 GPBP1Q86WP2 473 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ZNF397Q8NF99 534 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CEP63Q96MT8 703 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 TEPSINQ96N21 525 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SLF1Q9BQI6 1058 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ZNF341Q9BYN7 854 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 WDR11Q9BZH6 1224 aa13.86□□□□□ -0.19
TRAF3IP3-213ENST00000478359 MED24O75448 989 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SLU7O95391 586 aaKnown RBP13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SSBP05455 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CYP11B2P19099 503 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SLC12A3P55017 1021 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PPP2R5CQ13362 524 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KIF4BQ2VIQ3 1234 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CEP55Q53EZ4 464 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 DNAJC7Q99615 494 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 AS3MTQ9HBK9 375 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ZNHIT6Q9NWK9 470 aaKnown RBP13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 VAV3Q9UKW4 847 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 BCS1LQ9Y276 419 aa13.85□□□□□ -0.19
TRAF3IP3-213ENST00000478359 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
TRAF3IP3-213ENST00000478359 HSD17B4P51659 736 aa13.84□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ZYXQ15942 572 aaKnown RBP13.84□□□□□ -0.19
TRAF3IP3-213ENST00000478359 TRIM65Q6PJ69 517 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms