RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
SMARCE1-209ENST00000478349 GTPBP6O43824 516 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 HOXD8P13378 290 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 UBA1P22314 1058 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 NEDD9Q14511 834 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 TJAP1Q5JTD0 557 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 MYSM1Q5VVJ2 828 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 GDF6Q6KF10 455 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 ZNF654Q8IZM8 581 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 KAT2BQ92831 832 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 THEGQ9P2T0 379 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 YBX2Q9Y2T7 364 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 EMSYQ7Z589 1322 aa16.68■□□□□ 0.26
SMARCE1-209ENST00000478349 PRC1O43663 620 aa16.67■□□□□ 0.26
SMARCE1-209ENST00000478349 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
SMARCE1-209ENST00000478349 RABGGTBP53611 331 aa16.67■□□□□ 0.26
SMARCE1-209ENST00000478349 CNKSR3Q6P9H4 555 aa16.67■□□□□ 0.26
SMARCE1-209ENST00000478349 IGDCC4Q8TDY8 1250 aa16.67■□□□□ 0.26
SMARCE1-209ENST00000478349 ATXN2LQ8WWM7 1075 aaKnown RBP16.67■□□□□ 0.26
SMARCE1-209ENST00000478349 HDAC6Q9UBN7 1215 aa16.67■□□□□ 0.26
SMARCE1-209ENST00000478349 A0A0C4DFX4 3053 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 HAS3O00219 553 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 FIBPO43427 364 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 CYTH3O43739 400 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 SYNE3Q6ZMZ3 975 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 NLRX1Q86UT6 975 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 HERC6Q8IVU3 1022 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 GIMAP8Q8ND71 665 aaPredicted RBP16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 CDHR1Q96JP9 859 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 INPP4AQ96PE3 977 aaPredicted RBP16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 ZNF215Q9UL58 517 aaPredicted RBP16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
SMARCE1-209ENST00000478349 ABHD14A-ACY1A0A1B0GW23 586 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 RGS20O76081 388 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 CA3P07451 260 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 GNAT1P11488 350 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 CKBP12277 381 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 LIFRP42702 1097 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 ANTXR2P58335 489 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 HSDL1Q3SXM5 330 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 METTL7BQ6UX53 244 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 ZBED2Q9BTP6 218 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 USP26Q9BXU7 913 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 EHMT1Q9H9B1 1298 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 ANO2Q9NQ90 1003 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
SMARCE1-209ENST00000478349 C17orf102A2RUQ5 167 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 PIK3CDO00329 1044 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 TLL1O43897 1013 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 CAND2O75155 1236 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 ICAM3P32942 547 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 IKBKEQ14164 716 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 AAK1Q2M2I8 961 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 USP38Q8NB14 1042 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 PPP1R13LQ8WUF5 828 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 VWCEQ96DN2 955 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
SMARCE1-209ENST00000478349 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 H3BRB1 525 aa16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 SH2B2O14492 632 aaPredicted RBP16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 CXCL10P02778 98 aa16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 MRPS5P82675 430 aaKnown RBP16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 SLC35G1Q2M3R5 365 aa16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 TEX2Q8IWB9 1127 aa16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 DHX38Q92620 1227 aaKnown RBP16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 TUT1Q9H6E5 874 aaKnown RBP16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
SMARCE1-209ENST00000478349 SPDYE3A6NKU9 549 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 SPATA31C2B4DYI2 1134 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 SLC27A2O14975 620 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 LGALS2P05162 132 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 MYOGP15173 224 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 WDR5P61964 334 aaKnown RBP16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 ADGRE1Q14246 886 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 SERINC5Q86VE9 423 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 ATP6V0A1Q93050 837 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 LSG1Q9H089 658 aaKnown RBP16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 PSTPIP2Q9H939 334 aa16.62■□□□□ 0.25
SMARCE1-209ENST00000478349 SORBS3O60504 671 aa16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 THPOP40225 353 aa16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 SKIV2LQ15477 1246 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 CCDC85BQ15834 202 aaPredicted RBP16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 CREB3L3Q68CJ9 461 aa16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 MICALL1Q8N3F8 863 aa16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 GPRASP2Q96D09 838 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms