RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 MAGEA10P43363 369 aaPredicted RBP6.91□□□□□ -1.3
LMBR1-216ENST00000477983 LSAMPQ13449 338 aa6.91□□□□□ -1.3
LMBR1-216ENST00000477983 RGL3Q3MIN7 710 aa6.91□□□□□ -1.3
LMBR1-216ENST00000477983 DENND5AQ6IQ26 1287 aa6.91□□□□□ -1.3
LMBR1-216ENST00000477983 MICAL1Q8TDZ2 1067 aa6.91□□□□□ -1.3
LMBR1-216ENST00000477983 C1orf159Q96HA4 380 aa6.91□□□□□ -1.3
LMBR1-216ENST00000477983 EPN3Q9H201 632 aa6.91□□□□□ -1.3
LMBR1-216ENST00000477983 NPFFR2Q9Y5X5 522 aa6.91□□□□□ -1.3
LMBR1-216ENST00000477983 HGSO14964 777 aaPredicted RBP6.9□□□□□ -1.3
LMBR1-216ENST00000477983 DDAH1O94760 285 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 GNL2Q13823 731 aaKnown RBP6.9□□□□□ -1.3
LMBR1-216ENST00000477983 CHRNA2Q15822 529 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 ZNF827Q17R98 1081 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 PRSS53Q2L4Q9 553 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 EMC4Q5J8M3 183 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 SLC35F1Q5T1Q4 408 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 FBXL7Q9UJT9 491 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 MYRFQ9Y2G1 1151 aa6.9□□□□□ -1.3
LMBR1-216ENST00000477983 MROH6A6NGR9 719 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 PLATP00750 562 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 NKX3-2P78367 333 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 ADAM9Q13443 819 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 TBC1D10BQ4KMP7 808 aaPredicted RBP6.89□□□□□ -1.31
LMBR1-216ENST00000477983 STK32CQ86UX6 486 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 PPIL6Q8IXY8 311 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 LGI4Q8N135 537 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 TXNDC5Q8NBS9 432 aaKnown RBP6.89□□□□□ -1.31
LMBR1-216ENST00000477983 TMEM145Q8NBT3 493 aa6.89□□□□□ -1.31
LMBR1-216ENST00000477983 COA3Q9Y2R0 106 aaPredicted RBP6.89□□□□□ -1.31
LMBR1-216ENST00000477983 FGRP09769 529 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 LCP1P13796 627 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 STAT5AP42229 794 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 MCTP2Q6DN12 878 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 ZNF428Q96B54 188 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 SSBP3Q9BWW4 388 aaPredicted RBP6.88□□□□□ -1.31
LMBR1-216ENST00000477983 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 DTLQ9NZJ0 730 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 HSPBP1Q9NZL4 362 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 PCDHA2Q9Y5H9 948 aa6.88□□□□□ -1.31
LMBR1-216ENST00000477983 TOP2AP11388 1531 aaKnown RBP6.87□□□□□ -1.31
LMBR1-216ENST00000477983 TCRBV5S2A0A599 114 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 C9orf118A6NHY6 69 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 DDX3XO00571 662 aaKnown RBP eCLIP6.87□□□□□ -1.31
LMBR1-216ENST00000477983 GJB6O95452 261 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 ZNF28P17035 718 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 KCNJ6P48051 423 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 ADAM17P78536 824 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 MAP4K2Q12851 820 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 EEPD1Q7L9B9 569 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 FAM124AQ86V42 546 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 ARRDC4Q8NCT1 418 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 TOE1Q96GM8 510 aaKnown RBP6.87□□□□□ -1.31
LMBR1-216ENST00000477983 SAMD11Q96NU1 681 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 GPR20Q99678 358 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.87□□□□□ -1.31
LMBR1-216ENST00000477983 TINF2Q9BSI4 451 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 ZNF408Q9H9D4 720 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 INVSQ9Y283 1065 aa6.87□□□□□ -1.31
LMBR1-216ENST00000477983 INSRRP14616 1297 aa6.86□□□□□ -1.31
LMBR1-216ENST00000477983 SLC10A6Q3KNW5 377 aa6.86□□□□□ -1.31
LMBR1-216ENST00000477983 STEAP3Q658P3 488 aa6.86□□□□□ -1.31
LMBR1-216ENST00000477983 BORAQ6PGQ7 559 aa6.86□□□□□ -1.31
LMBR1-216ENST00000477983 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.86□□□□□ -1.31
LMBR1-216ENST00000477983 C1QTNF3Q9BXJ4 246 aa6.86□□□□□ -1.31
LMBR1-216ENST00000477983 SMPD4Q9NXE4 827 aa6.86□□□□□ -1.31
LMBR1-216ENST00000477983 CLDND1Q9NY35 253 aa6.86□□□□□ -1.31
LMBR1-216ENST00000477983 ATAD2BQ9ULI0 1458 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 LRG1P02750 347 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 GRIA2P42262 883 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 ARID5AQ03989 594 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 TEPPQ6URK8 271 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 PHOSPHO1Q8TCT1 267 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 CHAMP1Q96JM3 812 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 LCORQ96JN0 433 aaPredicted RBP6.85□□□□□ -1.31
LMBR1-216ENST00000477983 YIPF4Q9BSR8 244 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 SMOC1Q9H4F8 434 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 EPB41L1Q9H4G0 881 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 PODXL2Q9NZ53 605 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 PCDHB4Q9Y5E5 795 aa6.85□□□□□ -1.31
LMBR1-216ENST00000477983 EIF4G1Q04637 1599 aaKnown RBP6.84□□□□□ -1.31
LMBR1-216ENST00000477983 PEG3Q9GZU2 1588 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 A0A1W2PQU0 124 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 AGRPO00253 132 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 DGKIO75912 1065 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 IL13P35225 146 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 CYP4F22Q6NT55 531 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 KCTD13Q8WZ19 329 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 PCGF6Q9BYE7 350 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 GPR27Q9NS67 375 aa6.84□□□□□ -1.31
LMBR1-216ENST00000477983 SMARCA2P51531 1590 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 C1QTNF3-AMACRE9PGA6 284 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 CYP7B1O75881 506 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 SURF1Q15526 300 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 CPZQ66K79 652 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 RSPO2Q6UXX9 243 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-216ENST00000477983 MCF2L2Q86YR7 1114 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 MBD6Q96DN6 1003 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms