RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 CLEC1BQ9P126 229 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 SYNPO2Q9UMS6 1093 aa11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 USP15Q9Y4E8 981 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-206ENST00000477836 RSPH10B2B2RC85 870 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 NFIBO00712 420 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 RSPH10BP0C881 870 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 CALML3P27482 149 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 BMPR1AP36894 532 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 THPOP40225 353 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 COASYQ13057 564 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 AAMPQ13685 434 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 KCTD1Q719H9 257 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 CHST3Q7LGC8 479 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 TMEM105Q8N8V8 129 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 IL17RAQ96F46 866 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 GMCL1Q96IK5 515 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 MPHOSPH6Q99547 160 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 IL1RAPL2Q9NP60 686 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 PRR12Q9ULL5 1215 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 CACNA1GO43497 2377 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 GVINP1Q7Z2Y8 2422 aa11.49□□□□□ -0.57
SMARCB1-206ENST00000477836 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 MMP1P03956 469 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 PSEN2P49810 448 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 SEPT8Q92599 483 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 PPP2R3CQ969Q6 453 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 BARX2Q9UMQ3 279 aaPredicted RBP11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 RWDD3Q9Y3V2 267 aa11.48□□□□□ -0.57
SMARCB1-206ENST00000477836 PLA2G6O60733 806 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 GH1P01241 217 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 ICAM1P05362 532 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 LINC00271P0C7V0 271 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 EDNRBP24530 442 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 MFSD10Q14728 455 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 DGKDQ16760 1214 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 LY6KQ17RY6 165 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 KIAA0753Q2KHM9 967 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 RNF207Q6ZRF8 634 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 DHX37Q8IY37 1157 aaKnown RBP11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 EFHBQ8N7U6 833 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 KATNAL1Q9BW62 490 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 PUS7LQ9H0K6 701 aaKnown RBP11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 BCL11AQ9H165 835 aa11.47□□□□□ -0.57
SMARCB1-206ENST00000477836 TSPY3P0CV98 308 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 TSPY8P0CW00 308 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 NRIP1P48552 1158 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 ARHGAP1Q07960 439 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 CAMK1Q14012 370 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 HIC1Q14526 733 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 UBE3CQ15386 1083 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 RASGRP2Q7LDG7 609 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 ERC1Q8IUD2 1116 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 KIAA2013Q8IYS2 634 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 ZNF287Q9HBT7 754 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 MTMR7Q9Y216 660 aa11.46□□□□□ -0.57
SMARCB1-206ENST00000477836 NCOR2Q9Y618 2525 aa11.46□□□□□ -0.58
SMARCB1-206ENST00000477836 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 GLP2RO95838 553 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 ZNF286BP0CG31 522 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 DNAJB1P25685 340 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 CCDC62Q6P9F0 684 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 SEPT14Q6ZU15 432 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 DNERQ8NFT8 737 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 NEDD1Q8NHV4 660 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 KCNG4Q8TDN1 519 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 CLP1Q92989 425 aaKnown RBP11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 OSBPL7Q9BZF2 842 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 RANBP17Q9H2T7 1088 aaKnown RBP11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 PCDHGC5Q9Y5F6 944 aa11.45□□□□□ -0.58
SMARCB1-206ENST00000477836 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 B4DLN1 442 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 HAS3O00219 553 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 F2P00734 622 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 CTSHP09668 335 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 IFIT2P09913 472 aaKnown RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 ATF7P17544 494 aaPredicted RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 SP100P23497 879 aaPredicted RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 SLC16A2P36021 539 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 MRPL12P52815 198 aaKnown RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 TFAP4Q01664 338 aa11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 BTG3Q14201 252 aaPredicted RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 PUM1Q14671 1186 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
SMARCB1-206ENST00000477836 B4GALNT3Q6L9W6 998 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms