RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
PDE6D-204ENST00000477748 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
PDE6D-204ENST00000477748 ALDH8A1Q9H2A2 487 aaPredicted RBP16.25■□□□□ 0.19
PDE6D-204ENST00000477748 MTIF3Q9H2K0 278 aaKnown RBP16.25■□□□□ 0.19
PDE6D-204ENST00000477748 A6NJR5 290 aa16.24■□□□□ 0.19
PDE6D-204ENST00000477748 EIF5BO60841 1220 aaKnown RBP16.24■□□□□ 0.19
PDE6D-204ENST00000477748 CYP2C18P33260 490 aa16.24■□□□□ 0.19
PDE6D-204ENST00000477748 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
PDE6D-204ENST00000477748 WWC2Q6AWC2 1192 aa16.24■□□□□ 0.19
PDE6D-204ENST00000477748 NOC4LQ9BVI4 516 aaKnown RBP16.24■□□□□ 0.19
PDE6D-204ENST00000477748 UPF3BQ9BZI7 483 aaKnown RBP16.24■□□□□ 0.19
PDE6D-204ENST00000477748 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
PDE6D-204ENST00000477748 IL23AQ9NPF7 189 aa16.24■□□□□ 0.19
PDE6D-204ENST00000477748 DDX41Q9UJV9 622 aaKnown RBP16.24■□□□□ 0.19
PDE6D-204ENST00000477748 FRMPD4Q14CM0 1322 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 VCANP13611 3396 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 DNAJB2P25686 324 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 NAPAP54920 295 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 ARHGAP1Q07960 439 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 TOB2Q14106 344 aaPredicted RBP16.23■□□□□ 0.19
PDE6D-204ENST00000477748 UBE2SQ16763 222 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 NFRKBQ6P4R8 1299 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 KCNV1Q6PIU1 500 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 C16orf59Q7L2K0 433 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 AFG1LQ8WV93 481 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
PDE6D-204ENST00000477748 TTYH1Q9H313 450 aaPredicted RBP16.23■□□□□ 0.19
PDE6D-204ENST00000477748 PRUNE2Q8WUY3 3088 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 NID2Q14112 1375 aa16.23■□□□□ 0.19
PDE6D-204ENST00000477748 hCG_1984214I3L0E3 225 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 STAM2O75886 525 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 RGS20O76081 388 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 PDIA3P30101 505 aaKnown RBP16.22■□□□□ 0.19
PDE6D-204ENST00000477748 EVCP57679 992 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 CCT2P78371 535 aaKnown RBP16.22■□□□□ 0.19
PDE6D-204ENST00000477748 MRPS9P82933 396 aaKnown RBP16.22■□□□□ 0.19
PDE6D-204ENST00000477748 PTPN11Q06124 597 aaPredicted RBP16.22■□□□□ 0.19
PDE6D-204ENST00000477748 GNPTABQ3T906 1256 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 ZNF365Q70YC5 407 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 DHX37Q8IY37 1157 aaKnown RBP16.22■□□□□ 0.19
PDE6D-204ENST00000477748 ZNF713Q8N859 430 aaPredicted RBP16.22■□□□□ 0.19
PDE6D-204ENST00000477748 HERVK_113Q902F9 699 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 RTEL1Q9NZ71 1219 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 SCN10AQ9Y5Y9 1956 aa16.22■□□□□ 0.19
PDE6D-204ENST00000477748 SPDYE3A6NKU9 549 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 STXBP3O00186 592 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 PFKMP08237 780 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 MMP3P08254 477 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 ACRP10323 421 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 AKAP17AQ02040 695 aaKnown RBP16.21■□□□□ 0.19
PDE6D-204ENST00000477748 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 PCNX4Q63HM2 1172 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 PPP1R18Q6NYC8 613 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 TIFAQ96CG3 184 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
PDE6D-204ENST00000477748 WNT8AQ9H1J5 351 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 PRDM6Q9NQX0 595 aa16.21■□□□□ 0.19
PDE6D-204ENST00000477748 TRMT13Q9NUP7 481 aaKnown RBP16.21■□□□□ 0.19
PDE6D-204ENST00000477748 UMODL1Q5DID0 1318 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 SMCO2A6NFE2 343 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 SORBS3O60504 671 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 FGBP02675 491 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 TGFB3P10600 412 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 SCG2P13521 617 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 ADCY7P51828 1080 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 CCL23P55773 120 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 ANAPC15P60006 121 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 PFKFB3Q16875 520 aaPredicted RBP16.2■□□□□ 0.18
PDE6D-204ENST00000477748 NBPF20Q3BBV1 942 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 FAM47CQ5HY64 1035 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 XRRA1Q6P2D8 792 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 RPUSD2Q8IZ73 545 aaKnown RBP16.2■□□□□ 0.18
PDE6D-204ENST00000477748 EMID1Q96A84 441 aaPredicted RBP16.2■□□□□ 0.18
PDE6D-204ENST00000477748 EHMT1Q9H9B1 1298 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 NCOA5Q9HCD5 579 aaKnown RBP16.2■□□□□ 0.18
PDE6D-204ENST00000477748 RIC8AQ9NPQ8 531 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 BARHL2Q9NY43 387 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 PCDHA6Q9UN73 950 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 PCDHA8Q9Y5H6 950 aa16.2■□□□□ 0.18
PDE6D-204ENST00000477748 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
PDE6D-204ENST00000477748 GGPS1O95749 300 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 FOSL2P15408 326 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 UBA1P22314 1058 aaKnown RBP16.19■□□□□ 0.18
PDE6D-204ENST00000477748 ICAM3P32942 547 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 CHMP4BP1P59074 171 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 RAB30Q15771 203 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 DGKDQ16760 1214 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 CELF3Q5SZQ8 465 aaKnown RBP16.19■□□□□ 0.18
PDE6D-204ENST00000477748 NLRX1Q86UT6 975 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 MAFAQ8NHW3 353 aaPredicted RBP16.19■□□□□ 0.18
PDE6D-204ENST00000477748 PHKBQ93100 1093 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 ZNF274Q96GC6 653 aaPredicted RBP16.19■□□□□ 0.18
PDE6D-204ENST00000477748 INPP4AQ96PE3 977 aaPredicted RBP16.19■□□□□ 0.18
PDE6D-204ENST00000477748 SLC26A6Q9BXS9 759 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 GLT8D2Q9H1C3 349 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 MLXIPQ9HAP2 919 aa16.19■□□□□ 0.18
PDE6D-204ENST00000477748 CHD9Q3L8U1 2897 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms