RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 DDX12PQ92771 950 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 PLCD4Q9BRC7 762 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.78□□□□□ -0.68
CMC1-209ENST00000477739 PAPPAQ13219 1627 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 FAM153BP0C7A2 387 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 HOXA13P31271 388 aaPredicted RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 AMPD3Q01432 767 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 FAM153CQ494X1 144 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 CT47A1Q5JQC4 288 aaPredicted RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 IQCEQ6IPM2 695 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 THOC1Q96FV9 657 aaKnown RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 DDX47Q9H0S4 455 aaKnown RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 FAM153AQ9UHL3 310 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 HPCAL4Q9UM19 191 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 SLIT2O94813 1529 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 GOLGA6L7A0A1B0GV03 622 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 MYMKA6NI61 221 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 ERLIN2O94905 339 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 INPP5BP32019 993 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 E2F5Q15329 346 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 SBK1Q52WX2 424 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 PRR16Q569H4 304 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 TAB3Q8N5C8 712 aaPredicted RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 SPATA4Q8NEY3 305 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 TRIM9Q9C026 710 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 BCAS3Q9H6U6 928 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 IL17RBQ9NRM6 502 aa10.77□□□□□ -0.69
CMC1-209ENST00000477739 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
CMC1-209ENST00000477739 POTEB3A0JP26 581 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 POTECB2RU33 542 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 SLC37A4O43826 429 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 LONP1P36776 959 aaKnown RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 NNTQ13423 1086 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 SHROOM1Q2M3G4 852 aaPredicted RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 RCSD1Q6JBY9 416 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 POTEBQ6S5H4 581 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 AMIGO3Q86WK7 504 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 GPBP1Q86WP2 473 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 KIRREL3Q8IZU9 778 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 CD209Q9NNX6 404 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 BICDL2A1A5D9 508 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 PRPF6O94906 941 aaKnown RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 GNA11P29992 359 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 CDK8P49336 464 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 GPSM2P81274 684 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 NAALADL2Q58DX5 795 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 NT5DC1Q5TFE4 455 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 PACS2Q86VP3 889 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 SLF2Q8IX21 1173 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 TSEN2Q8NCE0 465 aaKnown RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 LRRC15Q8TF66 581 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 CTNNBL1Q8WYA6 563 aaPredicted RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 NOX5Q96PH1 765 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 OSBPL9Q96SU4 736 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 COL14A1Q05707 1796 aaKnown RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 MYO1FO00160 1098 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 TMOD1P28289 359 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 LARP4BQ92615 738 aaKnown RBP10.76□□□□□ -0.69
CMC1-209ENST00000477739 ARHGAP20Q9P2F6 1191 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 MYH7P12883 1935 aa10.76□□□□□ -0.69
CMC1-209ENST00000477739 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 SERPINB2P05120 415 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 POTEIP0CG38 1075 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 CCNE1P24864 410 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 CYP2J2P51589 502 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 VPS72Q15906 364 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 CNNM4Q6P4Q7 775 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 POTEEQ6S8J3 1075 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 CAPN12Q6ZSI9 719 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 DAAM2Q86T65 1068 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 FAM114A1Q8IWE2 563 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 ELOA2Q8IYF1 753 aaPredicted RBP10.75□□□□□ -0.69
CMC1-209ENST00000477739 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 PIGOQ8TEQ8 1089 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 RBM17Q96I25 401 aaKnown RBP10.75□□□□□ -0.69
CMC1-209ENST00000477739 FGFBP2Q9BYJ0 223 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 MYH3P11055 1940 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 SHANK3Q9BYB0 1731 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 PLCG2P16885 1265 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 SETQ01105 290 aaPredicted RBP10.75□□□□□ -0.69
CMC1-209ENST00000477739 KIAA0825Q8IV33 1275 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 MTMR8Q96EF0 704 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 PAIP2Q9BPZ3 127 aaKnown RBP10.75□□□□□ -0.69
CMC1-209ENST00000477739 FAM169AQ9Y6X4 670 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 ZNF263O14978 683 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 GDF11O95390 407 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 KCNJ6P48051 423 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 ZBED6P86452 979 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 GRM4Q14833 912 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 SFMBT2Q5VUG0 894 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 CCDC51Q96ER9 411 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 CELF4Q9BZC1 486 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms