RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 PRCPP42785 496 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 HMGCS2P54868 508 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 MXRA8Q9BRK3 442 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 FGFBP2Q9BYJ0 223 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 NRBP1Q9UHY1 535 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 MUTP22033 750 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 ARID5BQ14865 1188 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 NR1I3Q14994 352 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 SENP7Q9BQF6 1050 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 BTBD7Q9P203 1132 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 THSD7BQ9C0I4 1608 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 CENPFP49454 3210 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 BRCA2P51587 3418 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 ARP10275 920 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 TRAF1Q13077 416 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-203ENST00000477626 STAMQ92783 540 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 RAVER2Q9HCJ3 691 aaKnown RBP13.64□□□□□ -0.23
PRPF39-203ENST00000477626 PXMP2Q9NR77 195 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 SPTLC3Q9NUV7 552 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 SLITRK3O94933 977 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 IGHA2P01877 340 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 PSMC6P62333 389 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 RBM46Q8TBY0 533 aaKnown RBP13.64□□□□□ -0.23
PRPF39-203ENST00000477626 LRWD1Q9UFC0 647 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 ZKSCAN5Q9Y2L8 839 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 GDAQ9Y2T3 454 aa13.64□□□□□ -0.23
PRPF39-203ENST00000477626 ADGRA2Q96PE1 1338 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 STAT6P42226 847 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 AFMP43652 599 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 PPIL2Q13356 520 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 RRAGBQ5VZM2 374 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 FAM43AQ8N2R8 423 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 AGO4Q9HCK5 861 aaKnown RBP13.63□□□□□ -0.23
PRPF39-203ENST00000477626 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRPF39-203ENST00000477626 STK4Q13043 487 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 ISM2Q6H9L7 571 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 KCNN1Q92952 543 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 PURBQ96QR8 312 aaKnown RBP13.63□□□□□ -0.23
PRPF39-203ENST00000477626 JADE2Q9NQC1 790 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 CYP39A1Q9NYL5 469 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 LIMA1Q9UHB6 759 aaKnown RBP13.63□□□□□ -0.23
PRPF39-203ENST00000477626 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 DNAJC25-GNG10A0A024R161 153 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 CYP11B2P19099 503 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
PRPF39-203ENST00000477626 MOB2Q70IA6 237 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 NAT10Q9H0A0 1025 aaKnown RBP13.63□□□□□ -0.23
PRPF39-203ENST00000477626 PCDHA12Q9UN75 941 aa13.63□□□□□ -0.23
PRPF39-203ENST00000477626 PFASO15067 1338 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 CCZ1BP86790 482 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 CCZ1P86791 482 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 SPATA1Q5VX52 437 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 CENPPQ6IPU0 288 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 DPY19L2P1Q6NXN4 242 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 SYT2Q8N9I0 419 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 LARP4BQ92615 738 aaKnown RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 SEMA6BQ9H3T3 888 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 UNC45AQ9H3U1 944 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 PNMA2Q9UL42 364 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 ZMYM2Q9UBW7 1377 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 RASSF10A6NK89 507 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 ZNF131P52739 623 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 COG2Q14746 738 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 TKFCQ3LXA3 575 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 GLIS3Q8NEA6 775 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 INPP4AQ96PE3 977 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 TAAR1Q96RJ0 339 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
PRPF39-203ENST00000477626 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 ADD3Q9UEY8 706 aaKnown RBP13.62□□□□□ -0.23
PRPF39-203ENST00000477626 CXCL11O14625 94 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 LYPLA2O95372 231 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 MCM6Q14566 821 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 PRR16Q569H4 304 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 VSIG10LQ86VR7 867 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 RIT2Q99578 217 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 XPO4Q9C0E2 1151 aaKnown RBP13.61□□□□□ -0.23
PRPF39-203ENST00000477626 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 ARMCX5Q6P1M9 558 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 POTEBQ6S5H4 581 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 PDCD2LQ9BRP1 358 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 KDM3AQ9Y4C1 1321 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 FLOT1O75955 427 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 SMC2O95347 1197 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 FCER1AP12319 257 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 BMT2Q1RMZ1 405 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 LRRC55Q6ZSA7 311 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 KRT26Q7Z3Y9 468 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms