RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 GGPS1O95749 300 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 UBA1P22314 1058 aaKnown RBP25.01■■□□□ 1.59
COL9A3-211ENST00000477612 EVCP57679 992 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 FGD1P98174 961 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 APOBRQ0VD83 1088 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 SEMA3FQ13275 785 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 HSDL1Q3SXM5 330 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 TMEM240Q5SV17 173 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 WWC2Q6AWC2 1192 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 PPP1R18Q6NYC8 613 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 BRF1Q92994 677 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.01■■□□□ 1.592e-11■□□□□ 10.5
COL9A3-211ENST00000477612 V9GY48 417 aaPredicted RBP25.01■■□□□ 1.59
COL9A3-211ENST00000477612 UMODL1Q5DID0 1318 aa25.01■■□□□ 1.59
COL9A3-211ENST00000477612 CCDC196A0A1B0GTZ2 297 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 FIBPO43427 364 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 F2P00734 622 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 ADD1P35611 737 aaKnown RBP25■■□□□ 1.59
COL9A3-211ENST00000477612 SMAD3P84022 425 aaKnown RBP25■■□□□ 1.59
COL9A3-211ENST00000477612 RASIP1Q5U651 963 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 HEATR3Q7Z4Q2 680 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 RNPC3Q96LT9 517 aaKnown RBP25■■□□□ 1.59
COL9A3-211ENST00000477612 SENP7Q9BQF6 1050 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 WNT8AQ9H1J5 351 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 ZSWIM6Q9HCJ5 1215 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 IL23AQ9NPF7 189 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 SCN5AQ14524 2016 aa25■■□□□ 1.59
COL9A3-211ENST00000477612 METAP2P50579 478 aaKnown RBP eCLIP24.99■■□□□ 1.59
COL9A3-211ENST00000477612 NEDD9Q14511 834 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 FAM47CQ5HY64 1035 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 TYW1BQ6NUM6 668 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 RUFY3Q7L099 469 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 SPATA33Q96N06 139 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 KATNAL1Q9BW62 490 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 TM6SF1Q9BZW5 370 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 TANC1Q9C0D5 1861 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 RTEL1Q9NZ71 1219 aa24.99■■□□□ 1.59
COL9A3-211ENST00000477612 CYP2C9P11712 490 aa24.98■■□□□ 1.59
COL9A3-211ENST00000477612 PSRC1Q6PGN9 363 aaPredicted RBP24.98■■□□□ 1.59
COL9A3-211ENST00000477612 MLXIPQ9HAP2 919 aa24.98■■□□□ 1.59
COL9A3-211ENST00000477612 RIC8AQ9NPQ8 531 aa24.98■■□□□ 1.59
COL9A3-211ENST00000477612 BARHL2Q9NY43 387 aa24.98■■□□□ 1.59
COL9A3-211ENST00000477612 PCDHA6Q9UN73 950 aa24.98■■□□□ 1.59
COL9A3-211ENST00000477612 PCDHA8Q9Y5H6 950 aa24.98■■□□□ 1.59
COL9A3-211ENST00000477612 PITPNM1O00562 1244 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 PSEN2P49810 448 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 UBE2SQ16763 222 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 METTL7BQ6UX53 244 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 NLRX1Q86UT6 975 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 DEFB123Q8N688 67 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 GPRASP2Q96D09 838 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 CTAGE1Q96RT6 745 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 BCAS3Q9H6U6 928 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 GTF2IRD1Q9UHL9 959 aa24.97■■□□□ 1.59
COL9A3-211ENST00000477612 SPDYE3A6NKU9 549 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 STXBP3O00186 592 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 NAPAP54920 295 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 CCL23P55773 120 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 PFKFB3Q16875 520 aaPredicted RBP24.96■■□□□ 1.59
COL9A3-211ENST00000477612 ZNF365Q70YC5 407 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 PPP1R13LQ8WUF5 828 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 VWCEQ96DN2 955 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 C16orf70Q9BSU1 422 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 GLT8D2Q9H1C3 349 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 MTMR10Q9NXD2 777 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 UBIAD1Q9Y5Z9 338 aa24.96■■□□□ 1.59
COL9A3-211ENST00000477612 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.95■■□□□ 1.58
COL9A3-211ENST00000477612 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.95■■□□□ 1.58
COL9A3-211ENST00000477612 MAFGO15525 162 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 ACRP10323 421 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 MFSD10Q14728 455 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 NTRK3Q16288 839 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 PTGISQ16647 500 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 GDF6Q6KF10 455 aaPredicted RBP24.95■■□□□ 1.58
COL9A3-211ENST00000477612 Q7L0L9 218 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 RPUSD2Q8IZ73 545 aaKnown RBP24.95■■□□□ 1.58
COL9A3-211ENST00000477612 HERVK_113Q902F9 699 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 KAT6AQ92794 2004 aa24.95■■□□□ 1.58
COL9A3-211ENST00000477612 PRPF3O43395 683 aaKnown RBP24.94■■□□□ 1.58
COL9A3-211ENST00000477612 FOSP01100 380 aaPredicted RBP24.94■■□□□ 1.58
COL9A3-211ENST00000477612 ITGB5P18084 799 aa24.94■■□□□ 1.58
COL9A3-211ENST00000477612 CLK2P49760 499 aaKnown RBP24.94■■□□□ 1.58
COL9A3-211ENST00000477612 TOB2Q14106 344 aaPredicted RBP24.94■■□□□ 1.58
COL9A3-211ENST00000477612 KIAA0753Q2KHM9 967 aa24.94■■□□□ 1.58
COL9A3-211ENST00000477612 CYFIP1Q7L576 1253 aa24.94■■□□□ 1.58
COL9A3-211ENST00000477612 GIMAP8Q8ND71 665 aaPredicted RBP24.94■■□□□ 1.58
COL9A3-211ENST00000477612 CDHR1Q96JP9 859 aa24.94■■□□□ 1.58
COL9A3-211ENST00000477612 EHMT1Q9H9B1 1298 aa24.94■■□□□ 1.58
COL9A3-211ENST00000477612 HDAC6Q9UBN7 1215 aa24.94■■□□□ 1.58
COL9A3-211ENST00000477612 NAP1L2Q9ULW6 460 aaPredicted RBP24.94■■□□□ 1.58
COL9A3-211ENST00000477612 TET1Q8NFU7 2136 aa24.94■■□□□ 1.58
COL9A3-211ENST00000477612 SMCO2A6NFE2 343 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 SORBS3O60504 671 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 FGBP02675 491 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 PFKMP08237 780 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 ZNF286BP0CG31 522 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 PDIA3P30101 505 aaKnown RBP24.93■■□□□ 1.58
COL9A3-211ENST00000477612 RBL2Q08999 1139 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 BFSP2Q13515 415 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 PKN1Q16512 942 aa24.93■■□□□ 1.58
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