RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ERICH1Q86X53 443 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 CCDC65Q8IXS2 484 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 CCDC24Q8N4L8 307 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 WDR66Q8TBY9 1149 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 AGAP11Q8TF27 550 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 KIFAP3Q92845 792 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 HVCN1Q96D96 273 aa13.9□□□□□ -0.18
RTFDC1-207ENST00000477573 EVI5O60447 810 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 CDC25CP30307 473 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 HIBADHP31937 336 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 HDAC4P56524 1084 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 RHBDL3P58872 404 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 NLRP12P59046 1061 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 IFNL3Q8IZI9 196 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 LRRC43Q8N309 656 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 ATRIPQ8WXE1 791 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 CCT6BQ92526 530 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 RPGRQ92834 1020 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 VCXQ9H320 206 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 PIDD1Q9HB75 910 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 KIAA1468Q9P260 1216 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 CTNNAL1Q9UBT7 734 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 RCOR1Q9UKL0 485 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 IQSEC3Q9UPP2 1182 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 SLC4A7Q9Y6M7 1214 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 HSF2BPO75031 334 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 SERPINC1P01008 464 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 CYP7A1P22680 504 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 AMPD2Q01433 879 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 ADAM9Q13443 819 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 TXNRD1Q16881 649 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 TC2NQ8N9U0 490 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 ARMT1Q9H993 441 aa13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-207ENST00000477573 CAPN15O75808 1086 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 ALOX15P16050 662 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 HOXA10P31260 410 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 OXCT1P55809 520 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 CCDC70Q6NSX1 233 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 CACNA2D3Q8IZS8 1091 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 ARFGAP2Q8N6H7 521 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 CCDC63Q8NA47 563 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 ZNF653Q96CK0 615 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 FGD4Q96M96 766 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 CNNM2Q9H8M5 875 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 LEMD3Q9Y2U8 911 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 DAAM1Q9Y4D1 1078 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 ADGRG1Q9Y653 693 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 SLC4A4Q9Y6R1 1079 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 H3BQV1 296 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 SERPINB2P05120 415 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 PDIA3P30101 505 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 POLE2P56282 527 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 CKAP4Q07065 602 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 TAF11Q15544 211 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 IFFO2Q5TF58 517 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 PANX2Q96RD6 677 aa13.88□□□□□ -0.19
RTFDC1-207ENST00000477573 EP400Q96L91 3159 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 E7EVH7 732 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 ATP2A2P16615 1042 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 SPRED3Q2MJR0 410 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 ANO7Q6IWH7 933 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 ARHGAP18Q8N392 663 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 FAM167BQ9BTA0 163 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 FAM192AQ9GZU8 254 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 TNRC6CQ9HCJ0 1690 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 XDHP47989 1333 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
RTFDC1-207ENST00000477573 MAGEB6P1A0A0J9YX57 407 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 GMNCA6NCL1 334 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 GSG1L2A8MUP6 293 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 PLSCR1O15162 318 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 USO1O60763 962 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 BAG3O95817 575 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 NR1D1P20393 614 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 FLT3P36888 993 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 STAT6P42226 847 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 NNTQ13423 1086 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 NAA16Q6N069 864 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 EMBQ6PCB8 327 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 SLC35F6Q8N357 371 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 LCORLQ8N3X6 602 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 NSUN7Q8NE18 718 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 TMEM87BQ96K49 555 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 KRT23Q9C075 422 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 CROTQ9UKG9 612 aa13.86□□□□□ -0.19
RTFDC1-207ENST00000477573 SH3GLB1Q9Y371 365 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms