RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GGPS1O95749 300 aa20.27■□□□□ 0.84
PTPN7-209ENST00000477554 PFKFB3Q16875 520 aaPredicted RBP20.27■□□□□ 0.84
PTPN7-209ENST00000477554 MYSM1Q5VVJ2 828 aa20.27■□□□□ 0.84
PTPN7-209ENST00000477554 CUL5Q93034 780 aa20.27■□□□□ 0.84
PTPN7-209ENST00000477554 MTG1Q9BT17 334 aaPredicted RBP20.27■□□□□ 0.84
PTPN7-209ENST00000477554 PDRG1Q9NUG6 133 aa20.27■□□□□ 0.84
PTPN7-209ENST00000477554 BARHL2Q9NY43 387 aa20.27■□□□□ 0.84
PTPN7-209ENST00000477554 PCDHA6Q9UN73 950 aa20.27■□□□□ 0.84
PTPN7-209ENST00000477554 PCDHA8Q9Y5H6 950 aa20.27■□□□□ 0.84
PTPN7-209ENST00000477554 ATP9AO75110 1047 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 ITGB5P18084 799 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 CYP2C18P33260 490 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 HIC1Q14526 733 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 SHHQ15465 462 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 CELF3Q5SZQ8 465 aaKnown RBP20.27■□□□□ 0.83
PTPN7-209ENST00000477554 PCNX4Q63HM2 1172 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 TDHQ8IZJ6 230 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 CYP2W1Q8TAV3 490 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 LBHD1Q9BQE6 289 aaPredicted RBP20.27■□□□□ 0.83
PTPN7-209ENST00000477554 ALDH8A1Q9H2A2 487 aaPredicted RBP20.27■□□□□ 0.83
PTPN7-209ENST00000477554 RIC8AQ9NPQ8 531 aa20.27■□□□□ 0.83
PTPN7-209ENST00000477554 SMCO2A6NFE2 343 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 SPATA31C2B4DYI2 1134 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 CABYRO75952 493 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 CYP2C9P11712 490 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 SCG2P13521 617 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 RAG1P15918 1043 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 DHX37Q8IY37 1157 aaKnown RBP20.26■□□□□ 0.83
PTPN7-209ENST00000477554 AIFM3Q96NN9 605 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 SLC26A6Q9BXS9 759 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 POLR3EQ9NVU0 708 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 PKD2L1Q9P0L9 805 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 TPCN1Q9ULQ1 816 aa20.26■□□□□ 0.83
PTPN7-209ENST00000477554 PRPF3O43395 683 aaKnown RBP20.25■□□□□ 0.83
PTPN7-209ENST00000477554 LARGE1O95461 756 aa20.25■□□□□ 0.83
PTPN7-209ENST00000477554 CLK2P49760 499 aaKnown RBP20.25■□□□□ 0.83
PTPN7-209ENST00000477554 C16orf59Q7L2K0 433 aa20.25■□□□□ 0.83
PTPN7-209ENST00000477554 RASGRP4Q8TDF6 673 aa20.25■□□□□ 0.83
PTPN7-209ENST00000477554 EMID1Q96A84 441 aaPredicted RBP20.25■□□□□ 0.83
PTPN7-209ENST00000477554 VWCEQ96DN2 955 aa20.25■□□□□ 0.83
PTPN7-209ENST00000477554 TIMP1P01033 207 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 ADCY7P51828 1080 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 FAM47CQ5HY64 1035 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 JAKMIP3Q5VZ66 844 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 CYFIP1Q7L576 1253 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 PPTC7Q8NI37 304 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 IL17RAQ96F46 866 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 SPATA33Q96N06 139 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 UIMC1Q96RL1 719 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 WNT8AQ9H1J5 351 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 VPS54Q9P1Q0 977 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 SCN5AQ14524 2016 aa20.24■□□□□ 0.83
PTPN7-209ENST00000477554 MROH7Q68CQ1 1323 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 SLC34A2O95436 690 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 ACRP10323 421 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 CSF2RAP15509 400 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 IFNAR1P17181 557 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 ICAM3P32942 547 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 AK2P54819 239 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 CCL23P55773 120 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 ZNF200P98182 395 aaPredicted RBP20.23■□□□□ 0.83
PTPN7-209ENST00000477554 SP4Q02446 784 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 SCRN1Q12765 414 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 LAMC2Q13753 1193 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 NOC4LQ9BVI4 516 aaKnown RBP20.23■□□□□ 0.83
PTPN7-209ENST00000477554 ANO3Q9BYT9 981 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 CDH23Q9H251 3354 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 UBIAD1Q9Y5Z9 338 aa20.23■□□□□ 0.83
PTPN7-209ENST00000477554 HOXD8P13378 290 aaPredicted RBP20.22■□□□□ 0.83
PTPN7-209ENST00000477554 GDF6Q6KF10 455 aaPredicted RBP20.22■□□□□ 0.83
PTPN7-209ENST00000477554 TRIM50Q86XT4 487 aa20.22■□□□□ 0.83
PTPN7-209ENST00000477554 SCLYQ96I15 445 aa20.22■□□□□ 0.83
PTPN7-209ENST00000477554 C16orf70Q9BSU1 422 aa20.22■□□□□ 0.83
PTPN7-209ENST00000477554 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
PTPN7-209ENST00000477554 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
PTPN7-209ENST00000477554 CCDC196A0A1B0GTZ2 297 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 A0A1W2PPC1 479 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 SPDYE3A6NKU9 549 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 EDIL3O43854 480 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 KCNA2P16389 499 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 DGKDQ16760 1214 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 PPP1R18Q6NYC8 613 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 WNT8BQ93098 351 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 ZNF274Q96GC6 653 aaPredicted RBP20.21■□□□□ 0.83
PTPN7-209ENST00000477554 HIPK3Q9H422 1215 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 MLXIPQ9HAP2 919 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 HDAC6Q9UBN7 1215 aa20.21■□□□□ 0.83
PTPN7-209ENST00000477554 HAS3O00219 553 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 TLR3O15455 904 aaKnown RBP20.2■□□□□ 0.82
PTPN7-209ENST00000477554 FIBPO43427 364 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 ARP10275 920 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 PSEN2P49810 448 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 FPGSQ05932 587 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 BRDTQ58F21 947 aaPredicted RBP20.2■□□□□ 0.82
PTPN7-209ENST00000477554 MFSD5Q6N075 450 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 DHX38Q92620 1227 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms