RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 TCP11Q8WWU5 503 aa14.77□□□□□ -0.04
DFFB-209ENST00000477548 ESR2Q92731 530 aa14.77□□□□□ -0.04
DFFB-209ENST00000477548 TJP1Q07157 1748 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 GRID2IPA4D2P6 1211 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.05
DFFB-209ENST00000477548 CLTAP09496 248 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 GHRP10912 638 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 PDE4DQ08499 809 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 C11orf91Q3C1V1 193 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 LCORLQ8N3X6 602 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 BATF3Q9NR55 127 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 CNOT8Q9UFF9 292 aaKnown RBP14.77□□□□□ -0.05
DFFB-209ENST00000477548 PACSIN2Q9UNF0 486 aaPredicted RBP14.77□□□□□ -0.05
DFFB-209ENST00000477548 ABCA3Q99758 1704 aa14.77□□□□□ -0.05
DFFB-209ENST00000477548 MYH6P13533 1939 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 PEX19P40855 299 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 EHHADHQ08426 723 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 GRIK3Q13003 919 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 SEC23AQ15436 765 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 IFIT1BQ5T764 474 aaKnown RBP14.76□□□□□ -0.05
DFFB-209ENST00000477548 CACNA2D4Q7Z3S7 1137 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 CCDC63Q8NA47 563 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 ISCUQ9H1K1 167 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 TOGARAM1Q9Y4F4 1720 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 TRIM37O94972 964 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 ITGA6P23229 1130 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 MAGOHP61326 146 aaKnown RBP14.76□□□□□ -0.05
DFFB-209ENST00000477548 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 HLFQ16534 295 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 DTHD1Q6ZMT9 781 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 MAGOHBQ96A72 148 aaKnown RBP14.76□□□□□ -0.05
DFFB-209ENST00000477548 SPATS2LQ9NUQ6 558 aaKnown RBP14.76□□□□□ -0.05
DFFB-209ENST00000477548 H0YGN5 161 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 ADAMTS2O95450 1211 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 GNAT2P19087 354 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 SF3A3Q12874 501 aaKnown RBP eCLIP14.76□□□□□ -0.05
DFFB-209ENST00000477548 UAP1Q16222 522 aaPredicted RBP14.76□□□□□ -0.05
DFFB-209ENST00000477548 VWA3BQ502W6 1294 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
DFFB-209ENST00000477548 MIGA1Q8NAN2 632 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 CCDC197Q8NCU1 140 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.76□□□□□ -0.05
DFFB-209ENST00000477548 SWAP70Q9UH65 585 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 NFS1Q9Y697 457 aa14.76□□□□□ -0.05
DFFB-209ENST00000477548 AKAP11Q9UKA4 1901 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 CCT8L1PA6NM43 557 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 ORC4O43929 436 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 MYL1P05976 194 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 RBM5P52756 815 aaKnown RBP eCLIP14.75□□□□□ -0.05
DFFB-209ENST00000477548 DDX42Q86XP3 938 aaKnown RBP eCLIP14.75□□□□□ -0.05
DFFB-209ENST00000477548 ENAHQ8N8S7 591 aaPredicted RBP14.75□□□□□ -0.05
DFFB-209ENST00000477548 ANKS4BQ8N8V4 417 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 SPATA5Q8NB90 893 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 ZNF483Q8TF39 744 aaPredicted RBP14.75□□□□□ -0.05
DFFB-209ENST00000477548 TAF4BQ92750 862 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 NDST4Q9H3R1 872 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 KIF9Q9HAQ2 790 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 SIK3Q9Y2K2 1263 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 PPIP5K2O43314 1243 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 DRD4P21917 467 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 CUL1Q13616 776 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 KRT71Q3SY84 523 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 AGBL2Q5U5Z8 902 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 CCDC84Q86UT8 332 aaPredicted RBP14.75□□□□□ -0.05
DFFB-209ENST00000477548 LMBR1Q8WVP7 490 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 CHMP6Q96FZ7 201 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 ISCA1Q9BUE6 129 aa14.75□□□□□ -0.05
DFFB-209ENST00000477548 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
DFFB-209ENST00000477548 ANP32DO95626 131 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 CSF1RP07333 972 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 PAEPP09466 180 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 ASIC1P78348 528 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 STK4Q13043 487 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 USP38Q8NB14 1042 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 ITFG2Q969R8 447 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 INPP4AQ96PE3 977 aaPredicted RBP14.74□□□□□ -0.05
DFFB-209ENST00000477548 SPAG5Q96R06 1193 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 ZSCAN10Q96SZ4 725 aaPredicted RBP14.74□□□□□ -0.05
DFFB-209ENST00000477548 GREM2Q9H772 168 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 EBF2Q9HAK2 575 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 KBTBD4Q9NVX7 518 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 FBXL5Q9UKA1 691 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 DCDC2CA8MYV0 355 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 PDE8BO95263 885 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 TBC1D1Q86TI0 1168 aaPredicted RBP14.74□□□□□ -0.05
DFFB-209ENST00000477548 C15orf41Q9Y2V0 281 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 L3MBTL1Q9Y468 752 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 CHD4Q14839 1912 aa14.74□□□□□ -0.05
DFFB-209ENST00000477548 FCER1AP12319 257 aa14.73□□□□□ -0.05
DFFB-209ENST00000477548 MTMR3Q13615 1198 aa14.73□□□□□ -0.05
DFFB-209ENST00000477548 CRELD2Q6UXH1 353 aaPredicted RBP14.73□□□□□ -0.05
DFFB-209ENST00000477548 TRPC6Q9Y210 931 aa14.73□□□□□ -0.05
DFFB-209ENST00000477548 ADAMTS3O15072 1205 aa14.73□□□□□ -0.05
DFFB-209ENST00000477548 CTNND1O60716 968 aaKnown RBP14.73□□□□□ -0.05
DFFB-209ENST00000477548 TMTC3Q6ZXV5 915 aa14.73□□□□□ -0.05
DFFB-209ENST00000477548 BZW1Q7L1Q6 419 aaKnown RBP14.73□□□□□ -0.05
DFFB-209ENST00000477548 PROCA1Q8NCQ7 364 aaPredicted RBP14.73□□□□□ -0.05
DFFB-209ENST00000477548 HELBQ8NG08 1087 aaPredicted RBP14.73□□□□□ -0.05
DFFB-209ENST00000477548 MDM1Q8TC05 714 aa14.73□□□□□ -0.05
DFFB-209ENST00000477548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms