RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 ARMC9Q7Z3E5 817 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 CACNA2D4Q7Z3S7 1137 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 HEATR3Q7Z4Q2 680 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 TAX1BP1Q86VP1 789 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 OTUD6BQ8N6M0 293 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 CABS1Q96KC9 395 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 ATP6V1G3Q96LB4 118 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 CDCA7Q9BWT1 371 aaPredicted RBP14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 MMRN2Q9H8L6 949 aa14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 RBM12Q9NTZ6 932 aaKnown RBP14.93□□□□□ -0.02
HLA-DMA-208ENST00000477541 GOLGA6L10A6NI86 522 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 ADAMTS3O15072 1205 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 PPP1R37O75864 691 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 PLEKP08567 350 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 VEGFAP15692 232 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 LSP1P33241 339 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 LIG3P49916 1009 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 MARSP56192 900 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 CDC37Q16543 378 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 SFMBT2Q5VUG0 894 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 LRRC55Q6ZSA7 311 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 RASGRP4Q8TDF6 673 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 SMCR8Q8TEV9 937 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 LRRC15Q8TF66 581 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 CALR3Q96L12 384 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 PLCB1Q9NQ66 1216 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 MINPP1Q9UNW1 487 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 PLSCR1O15162 318 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 HEXIM1O94992 359 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 MYBP10242 640 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 FCER1AP12319 257 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 NR1D1P20393 614 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 HNRNPH1P31943 449 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 CRKLP46109 303 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 NAP1L1P55209 391 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 EHHADHQ08426 723 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 BIRC3Q13489 604 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 SOGA3Q5TF21 947 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 MEI1Q5TIA1 1274 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 HGSNATQ68CP4 663 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 LARP4BQ92615 738 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 P3H4Q92791 437 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 LRRC45Q96CN5 670 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 PBKQ96KB5 322 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 CCDC43Q96MW1 224 aaKnown RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 SYT17Q9BSW7 474 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 ACTR5Q9H9F9 607 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 IL17RBQ9NRM6 502 aa14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 FAM207AQ9NSI2 230 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMA-208ENST00000477541 COL5A3P25940 1745 aaPredicted RBP14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 CCNT1O60563 726 aaKnown RBP14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 NAPAP54920 295 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 GSCP56915 257 aaPredicted RBP14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 GSTO1P78417 241 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 FKBP3Q00688 224 aaKnown RBP14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 MTMR3Q13615 1198 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 PTGISQ16647 500 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 SLC10A5Q5PT55 438 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 MTMR8Q96EF0 704 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 CDK5RAP3Q96JB5 506 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 MMTAG2Q9BU76 263 aaKnown RBP14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 COL4A3BPQ9Y5P4 624 aa14.91□□□□□ -0.02
HLA-DMA-208ENST00000477541 FAM107AO95990 144 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 HIBADHP31937 336 aaKnown RBP14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 MDH1P40925 334 aaKnown RBP14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 FNTAP49354 379 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 SLC7A5Q01650 507 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 SLC18A3Q16572 532 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 SPDYCQ5MJ68 293 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 NAA35Q5VZE5 725 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 RUFY4Q6ZNE9 571 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 STAG2Q8N3U4 1231 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 KAT2BQ92831 832 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 DRC1Q96MC2 740 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 INPP4AQ96PE3 977 aaPredicted RBP14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 ISCUQ9H1K1 167 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 MCM9Q9NXL9 1143 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 SEC63Q9UGP8 760 aaKnown RBP14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 TMEM59LQ9UK28 342 aa14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 BZW2Q9Y6E2 419 aaKnown RBP14.9□□□□□ -0.02
HLA-DMA-208ENST00000477541 ZNF233A6NK53 670 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 CYTH3O43739 400 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 SLC1A4P43007 532 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 RASSF7Q02833 373 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 GRB10Q13322 594 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 PDCLQ13371 301 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 LETM2Q2VYF4 491 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 TMEM119Q4V9L6 283 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 TDRD12Q587J7 1177 aaKnown RBP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 ZNF444Q8N0Y2 327 aaPredicted RBP14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 RAD54LQ92698 747 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 TAF4BQ92750 862 aa14.89□□□□□ -0.03
HLA-DMA-208ENST00000477541 MTMR9Q96QG7 549 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms