RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 BCS1LQ9Y276 419 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 NPHP3-ACAD11A0A0J9YXS1 232 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 GUCY2DQ02846 1103 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 UHMK1Q8TAS1 419 aaKnown RBP12.12□□□□□ -0.47
COL27A1-204ENST00000477421 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 NFAT5O94916 1531 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 K7ENM7 598 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 ZSCAN26Q16670 478 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 LRRN4CLQ8ND94 238 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 TAOK3Q9H2K8 898 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 MAGEF1Q9HAY2 307 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 LRRC53A6NM62 1247 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 PPP1R3GB7ZBB8 358 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 STXBP3O00186 592 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 DLATP10515 647 aaKnown RBP12.12□□□□□ -0.47
COL27A1-204ENST00000477421 NPR1P16066 1061 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 BMP6P22004 513 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 FAM102BQ5T8I3 360 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 GBP6Q6ZN66 633 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 PPM1KQ8N3J5 372 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 FNBP1Q96RU3 617 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
COL27A1-204ENST00000477421 CCDC151A5D8V7 595 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 SELENOSQ9BQE4 189 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 GINS2Q9Y248 185 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 EBAG9O00559 213 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
COL27A1-204ENST00000477421 TFRCP02786 760 aaKnown RBP12.11□□□□□ -0.47
COL27A1-204ENST00000477421 ARHGAP4P98171 946 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
COL27A1-204ENST00000477421 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 SYDE2Q5VT97 1194 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 KRT12Q99456 494 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 ZNF577Q9BSK1 485 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 PRM3Q9NNZ6 103 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 WNT7AO00755 349 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 GFPT2O94808 682 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 PDHBP11177 359 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
COL27A1-204ENST00000477421 STAT2P52630 851 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 NFIAQ12857 509 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 PAIP2Q9BPZ3 127 aaKnown RBP12.11□□□□□ -0.47
COL27A1-204ENST00000477421 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 ANKRD65E5RJM6 399 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 NCK2O43639 380 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 MYL1P05976 194 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 H2AFZP0C0S5 128 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
COL27A1-204ENST00000477421 SMTNP53814 917 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 MAP2K1Q02750 393 aaPredicted RBP12.11□□□□□ -0.47
COL27A1-204ENST00000477421 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 H2AFVQ71UI9 128 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 SFR1Q86XK3 245 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
COL27A1-204ENST00000477421 TNS2Q63HR2 1409 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 MYMKA6NI61 221 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 NDUFAB1O14561 156 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 TADA3O75528 432 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 GNA14O95837 355 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
COL27A1-204ENST00000477421 CC2D1AQ6P1N0 951 aaPredicted RBP12.1□□□□□ -0.47
COL27A1-204ENST00000477421 USP37Q86T82 979 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 MICALL1Q8N3F8 863 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 MRRFQ96E11 262 aaKnown RBP12.1□□□□□ -0.47
COL27A1-204ENST00000477421 DHX36Q9H2U1 1008 aaKnown RBP12.1□□□□□ -0.47
COL27A1-204ENST00000477421 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 RGL1Q9NZL6 768 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 LARSQ9P2J5 1176 aaKnown RBP12.1□□□□□ -0.47
COL27A1-204ENST00000477421 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
COL27A1-204ENST00000477421 GOLGA6L7A0A1B0GV03 622 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 ZNF185O15231 689 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 VPS41P49754 854 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 COASYQ13057 564 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 PPP1R7Q15435 360 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 VPS72Q15906 364 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 KSR1Q8IVT5 923 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 REXO1L1PQ8IX06 675 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 KRIT1O00522 736 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 EIF2AK2P19525 551 aaKnown RBP12.1□□□□□ -0.47
COL27A1-204ENST00000477421 DMTNQ08495 405 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 CASP8Q14790 479 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 MASTLQ96GX5 879 aa12.1□□□□□ -0.47
COL27A1-204ENST00000477421 CCDC114Q96M63 670 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms