RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 KIAA0355O15063 1070 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 TLR3O15455 904 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 CYP3A4P08684 503 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 XBP1P17861 261 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 CCT2P78371 535 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 TLE2Q04725 743 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 SCRN1Q12765 414 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 CXCL17Q6UXB2 119 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 SESTD1Q86VW0 696 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 DHX37Q8IY37 1157 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 C7orf61Q8IZ16 206 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 DAGLBQ8NCG7 672 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 CRYGNQ8WXF5 182 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 PHKBQ93100 1093 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 GTF3C6Q969F1 213 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 KIF2CQ99661 725 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 GDF15Q99988 308 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 KATNAL1Q9BW62 490 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 NCOA5Q9HCD5 579 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 UBIAD1Q9Y5Z9 338 aa14.14□□□□□ -0.15
CLCNKA-205ENST00000477360 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 MMP3P08254 477 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 CLTBP09497 229 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 SUPT20HL2P0C7V6 817 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 UBA1P22314 1058 aaKnown RBP14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 BEX3Q00994 111 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 ITGA7Q13683 1181 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 RABEP1Q15276 862 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 LY6KQ17RY6 165 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 TRIM60Q495X7 471 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 CEP55Q53EZ4 464 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 TMEM63BQ5T3F8 832 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 ANO3Q9BYT9 981 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 JADE2Q9NQC1 790 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 ATP11BQ9Y2G3 1177 aa14.13□□□□□ -0.15
CLCNKA-205ENST00000477360 ALPK3Q96L96 1907 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 F2P00734 622 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 CD4P01730 458 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 MTMR1Q13613 665 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 UBE2SQ16763 222 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 FAM126BQ8IXS8 530 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 AFG1LQ8WV93 481 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 LLPHQ9BRT6 129 aaKnown RBP14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 MLXIPQ9HAP2 919 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 PDLIM7Q9NR12 457 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 SH2B1Q9NRF2 756 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 TBX21Q9UL17 535 aa14.12□□□□□ -0.15
CLCNKA-205ENST00000477360 MEIS1O00470 390 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 GGPS1O95749 300 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 ITGB5P18084 799 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 CIITAP33076 1130 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 USP11P51784 963 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 IRX5P78411 483 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 FAAP100Q0VG06 881 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 SEMA3FQ13275 785 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 ME3Q16798 604 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 VTI1AQ96AJ9 217 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 SPATA33Q96N06 139 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 LBHD1Q9BQE6 289 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 MXRA8Q9BRK3 442 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 PCDHA4Q9UN74 947 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 GRIN2DO15399 1336 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 NFASCO94856 1347 aa14.11□□□□□ -0.15
CLCNKA-205ENST00000477360 HAS3O00219 553 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 PQBP1O60828 265 aaKnown RBP14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 MYL3P08590 195 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 KCNA2P16389 499 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 MCM2P49736 904 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 ARHGAP4P98171 946 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 SETQ01105 290 aaPredicted RBP14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 SP2Q02086 613 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 STK3Q13188 491 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 COPS5Q92905 334 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 KCNH7Q9NS40 1196 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 TMEM39AQ9NV64 488 aa14.1□□□□□ -0.15
CLCNKA-205ENST00000477360 SCN10AQ9Y5Y9 1956 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 M0R2N6 131 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 NOP56O00567 594 aaKnown RBP14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 ST18O60284 1047 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 NLRP5P59047 1200 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 MOXD1Q6UVY6 613 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 BLIDQ8IZY5 108 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 RTEL1Q9NZ71 1219 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 VPS54Q9P1Q0 977 aa14.09□□□□□ -0.15
CLCNKA-205ENST00000477360 CYP3A7-CYP3A51PA0A087WV96 503 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 CTDNEP1O95476 244 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 TIMP1P01033 207 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 RAG1P15918 1043 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 CYP3A7P24462 503 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 MAGEA10P43363 369 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 HMGN5P82970 282 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 NBPF20Q3BBV1 942 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 KAT2BQ92831 832 aa14.08□□□□□ -0.16
CLCNKA-205ENST00000477360 GPR20Q99678 358 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms