RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ZNF445P59923 1031 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 TRIML1Q8N9V2 468 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 DNAAF3Q8N9W5 541 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 PPWD1Q96BP3 646 aaKnown RBP20.15■□□□□ 0.82
VARS2-209ENST00000477288 PCP11498 1178 aaKnown RBP20.15■□□□□ 0.82
VARS2-209ENST00000477288 MTERF2Q49AM1 385 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 NDUFA8P51970 172 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 KCNQ4P56696 695 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 SPATA1Q5VX52 437 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 KCTD16Q68DU8 428 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 GANCQ8TET4 914 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 NXF1Q9UBU9 619 aaKnown RBP20.15■□□□□ 0.82
VARS2-209ENST00000477288 PCDHA7Q9UN72 937 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 RNF123Q5XPI4 1314 aa20.15■□□□□ 0.82
VARS2-209ENST00000477288 MEIS1O00470 390 aa20.14■□□□□ 0.82
VARS2-209ENST00000477288 CPP00450 1065 aa20.14■□□□□ 0.82
VARS2-209ENST00000477288 TCP1P17987 556 aaKnown RBP20.14■□□□□ 0.82
VARS2-209ENST00000477288 GCKP35557 465 aa20.14■□□□□ 0.82
VARS2-209ENST00000477288 APOEP02649 317 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 LRRC41Q15345 812 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 RRAGDQ9NQL2 400 aaPredicted RBP20.14■□□□□ 0.81
VARS2-209ENST00000477288 KIF24Q5T7B8 1368 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 SETSIPP0DME0 302 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 ANXA13P27216 316 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 STAT2P52630 851 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 PDIA3P30101 505 aaKnown RBP20.14■□□□□ 0.81
VARS2-209ENST00000477288 MAPK4P31152 587 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 RSBN1LQ6PCB5 846 aaPredicted RBP20.14■□□□□ 0.81
VARS2-209ENST00000477288 ZNF215Q9UL58 517 aaPredicted RBP20.14■□□□□ 0.81
VARS2-209ENST00000477288 ORC6Q9Y5N6 252 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 CLIC2O15247 247 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 BNIP3LO60238 219 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 BCAS4Q8TDM0 211 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 SPATA17Q96L03 361 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 MYO5CQ9NQX4 1742 aa20.14■□□□□ 0.81
VARS2-209ENST00000477288 BMP3P12645 472 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 GAP43P17677 238 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
VARS2-209ENST00000477288 GDAP1Q8TB36 358 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 ATP8B3O60423 1300 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 LIG3P49916 1009 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 MAGOHBQ96A72 148 aaKnown RBP20.13■□□□□ 0.81
VARS2-209ENST00000477288 ZSWIM6Q9HCJ5 1215 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 SEC31BQ9NQW1 1179 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 COPB1P53618 953 aaKnown RBP20.13■□□□□ 0.81
VARS2-209ENST00000477288 LLGL1Q15334 1064 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 GCNAQ96QF7 691 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 PIGSQ96S52 555 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 KRT10P13645 584 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 MAP2K2P36507 400 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 IL9RQ01113 521 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 THOC5Q13769 683 aaKnown RBP20.13■□□□□ 0.81
VARS2-209ENST00000477288 FAM186BQ8IYM0 893 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 ALKBH8Q96BT7 664 aaKnown RBP20.13■□□□□ 0.81
VARS2-209ENST00000477288 LRRC4Q9HBW1 653 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 KRT82Q9NSB4 513 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 FRMD3A2A2Y4 597 aa20.13■□□□□ 0.81
VARS2-209ENST00000477288 HMGB1P1B2RPK0 211 aaPredicted RBP20.13■□□□□ 0.81
VARS2-209ENST00000477288 M0R2C6 588 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 SYDE2Q5VT97 1194 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 KANSL2Q9H9L4 492 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ZBTB1Q9Y2K1 713 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 LRRN2O75325 713 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 IREB2P48200 963 aaKnown RBP20.12■□□□□ 0.81
VARS2-209ENST00000477288 SCRN1Q12765 414 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 WDR11Q9BZH6 1224 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ZNF233A6NK53 670 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 BRD1O95696 1058 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ELF1P32519 619 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 TMED2Q15363 201 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ANKRD20A4Q4UJ75 823 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ANKRD20A8PQ5CZ79 823 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ANKRD20A2Q5SQ80 823 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ANKRD20A1Q5TYW2 823 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 TMEM63CQ9P1W3 806 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 ABCC4O15439 1325 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 STK25O00506 426 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
VARS2-209ENST00000477288 ARL4AP40617 200 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 RASIP1Q5U651 963 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 MLH3Q9UHC1 1453 aa20.12■□□□□ 0.81
VARS2-209ENST00000477288 MARK3P27448 753 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 MORC4Q8TE76 937 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 KRT1P04264 644 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 TTC30AQ86WT1 665 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 TTC1Q99614 292 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 TUBGCP2Q9BSJ2 902 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 MAGEF1Q9HAY2 307 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 FAM8A1Q9UBU6 413 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 LAD1O00515 517 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 TMTC3Q6ZXV5 915 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 SIX6OS1Q8N1H7 587 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 TTC30BQ8N4P2 665 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 COA7Q96BR5 231 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 TRIM11Q96F44 468 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 HAUS4Q9H6D7 363 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 G3BP2Q9UN86 482 aaKnown RBP20.11■□□□□ 0.81
VARS2-209ENST00000477288 LMNB2Q03252 620 aa20.11■□□□□ 0.81
VARS2-209ENST00000477288 TBCKQ8TEA7 893 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms