RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 LBHD1Q9BQE6 289 aaPredicted RBP15.39■□□□□ 0.05
ACTN4-205ENST00000477174 SENP7Q9BQF6 1050 aa15.39■□□□□ 0.05
ACTN4-205ENST00000477174 SLKQ9H2G2 1235 aaPredicted RBP15.39■□□□□ 0.05
ACTN4-205ENST00000477174 C6orf50Q9HD87 102 aa15.39■□□□□ 0.05
ACTN4-205ENST00000477174 PDLIM7Q9NR12 457 aa15.39■□□□□ 0.05
ACTN4-205ENST00000477174 SH3GLB2Q9NR46 395 aa15.39■□□□□ 0.05
ACTN4-205ENST00000477174 TMEM39AQ9NV64 488 aa15.39■□□□□ 0.05
ACTN4-205ENST00000477174 GRIN2DO15399 1336 aa15.39■□□□□ 0.05
ACTN4-205ENST00000477174 A0A1W2PPC1 479 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 TRIM43BA6NCK2 446 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 KIAA0355O15063 1070 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 PFKFB2O60825 505 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 CDKL5O76039 1030 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 MAGEA10P43363 369 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-205ENST00000477174 CLK2P49760 499 aaKnown RBP15.38■□□□□ 0.05
ACTN4-205ENST00000477174 AK2P54819 239 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 STK3Q13188 491 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 AP3B2Q13367 1082 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 NEDD9Q14511 834 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 FAM177A1Q8N128 213 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-205ENST00000477174 BICD2Q8TD16 824 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 TRIM43Q96BQ3 446 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-205ENST00000477174 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 MLXIPQ9HAP2 919 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 PRDM5Q9NQX1 630 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-205ENST00000477174 TPCN1Q9ULQ1 816 aa15.38■□□□□ 0.05
ACTN4-205ENST00000477174 TLR3O15455 904 aaKnown RBP15.37■□□□□ 0.05
ACTN4-205ENST00000477174 GGPS1O95749 300 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 CD4P01730 458 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 MMP3P08254 477 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 ITGB5P18084 799 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 UBA1P22314 1058 aaKnown RBP15.37■□□□□ 0.05
ACTN4-205ENST00000477174 PSMC6P62333 389 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 HABP4Q5JVS0 413 aaKnown RBP15.37■□□□□ 0.05
ACTN4-205ENST00000477174 NFRKBQ6P4R8 1299 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 FAM126BQ8IXS8 530 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 GIMAP8Q8ND71 665 aaPredicted RBP15.37■□□□□ 0.05
ACTN4-205ENST00000477174 CCDC148Q8NFR7 591 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 SPATA33Q96N06 139 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 UBIAD1Q9Y5Z9 338 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
ACTN4-205ENST00000477174 PPFIA3O75145 1194 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 DEXIO95424 95 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 HOXD8P13378 290 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-205ENST00000477174 PTPN11Q06124 597 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-205ENST00000477174 SCRN1Q12765 414 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 SEMA3FQ13275 785 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 METTL7BQ6UX53 244 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 ANO3Q9BYT9 981 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 JADE2Q9NQC1 790 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 TBX21Q9UL17 535 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 ALPK3Q96L96 1907 aa15.36■□□□□ 0.05
ACTN4-205ENST00000477174 SUPT20HL2P0C7V6 817 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 RAG1P15918 1043 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 SREBF1P36956 1147 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 RBM25P49756 843 aaKnown RBP15.35■□□□□ 0.05
ACTN4-205ENST00000477174 MDM2Q00987 491 aaPredicted RBP15.35■□□□□ 0.05
ACTN4-205ENST00000477174 MTMR1Q13613 665 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 NBPF20Q3BBV1 942 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 HSDL1Q3SXM5 330 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 REXO1Q8N1G1 1221 aaKnown RBP15.35■□□□□ 0.05
ACTN4-205ENST00000477174 C22orf23Q9BZE7 217 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 UBE2OQ9C0C9 1292 aaKnown RBP15.35■□□□□ 0.05
ACTN4-205ENST00000477174 TMEM260Q9NX78 707 aa15.35■□□□□ 0.05
ACTN4-205ENST00000477174 TIMP1P01033 207 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 CYP3A4P08684 503 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 NLRP5P59047 1200 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 ME3Q16798 604 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 CEP55Q53EZ4 464 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 CYFIP1Q7L576 1253 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 IL27Q8NEV9 243 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 KAT2BQ92831 832 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 BADQ92934 168 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 MXRA8Q9BRK3 442 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 KATNAL1Q9BW62 490 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 TRPV6Q9H1D0 765 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 BCAS3Q9H6U6 928 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 VPS54Q9P1Q0 977 aa15.34■□□□□ 0.05
ACTN4-205ENST00000477174 MEIS1O00470 390 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 NOP56O00567 594 aaKnown RBP15.33■□□□□ 0.04
ACTN4-205ENST00000477174 B4GALT4O60513 344 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 ITGB8P26012 769 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 ARHGAP4P98171 946 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 NIPA1Q7RTP0 329 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 SESTD1Q86VW0 696 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 CRYGNQ8WXF5 182 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 KIF2CQ99661 725 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 UPF2Q9HAU5 1272 aaKnown RBP15.33■□□□□ 0.04
ACTN4-205ENST00000477174 KCNH7Q9NS40 1196 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 TRIOBPQ9H2D6 2365 aa15.33■□□□□ 0.04
ACTN4-205ENST00000477174 HAS3O00219 553 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 SORBS3O60504 671 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 ATP9AO75110 1047 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 F2P00734 622 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 KCNA2P16389 499 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 XBP1P17861 261 aa15.32■□□□□ 0.04
ACTN4-205ENST00000477174 ZNF76P36508 570 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms