RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 FCHSD1Q86WN1 690 aa20.11■□□□□ 0.81
SREBF1-211ENST00000476994 FERMT2Q96AC1 680 aa20.11■□□□□ 0.81
SREBF1-211ENST00000476994 ZSCAN16Q9H4T2 348 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-211ENST00000476994 DOCK5Q9H7D0 1870 aa20.1■□□□□ 0.81
SREBF1-211ENST00000476994 NONOQ15233 471 aaKnown RBP eCLIP20.1■□□□□ 0.813e-6■■■□□ 17.5
SREBF1-211ENST00000476994 TRIM60Q495X7 471 aa20.1■□□□□ 0.81
SREBF1-211ENST00000476994 MYSM1Q5VVJ2 828 aa20.1■□□□□ 0.81
SREBF1-211ENST00000476994 FAM173BQ6P4H8 233 aa20.1■□□□□ 0.81
SREBF1-211ENST00000476994 IL31RAQ8NI17 732 aa20.1■□□□□ 0.81
SREBF1-211ENST00000476994 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
SREBF1-211ENST00000476994 SYNGAP1Q96PV0 1343 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 SPDYE3A6NKU9 549 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 POTEB2H3BUK9 544 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 SNX17Q15036 470 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 INF2Q27J81 1249 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 C1orf53Q5VUE5 145 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 TBCKQ8TEA7 893 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 FAM184BQ9ULE4 1060 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 PHF24Q9UPV7 400 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 WDR81Q562E7 1941 aa20.09■□□□□ 0.81
SREBF1-211ENST00000476994 COL6A3P12111 3177 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 PGK1P00558 417 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 CYP3A4P08684 503 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 EDNRBP24530 442 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 Q7L0L9 218 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 DNERQ8NFT8 737 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 STXBP5LQ9Y2K9 1186 aa20.08■□□□□ 0.81
SREBF1-211ENST00000476994 ALDH5A1P51649 535 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-211ENST00000476994 ARHGAP4P98171 946 aa20.07■□□□□ 0.8
SREBF1-211ENST00000476994 GNL2Q13823 731 aaKnown RBP20.07■□□□□ 0.8
SREBF1-211ENST00000476994 PGM5Q15124 567 aa20.07■□□□□ 0.8
SREBF1-211ENST00000476994 ZNF467Q7Z7K2 595 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-211ENST00000476994 CHAMP1Q96JM3 812 aa20.07■□□□□ 0.8
SREBF1-211ENST00000476994 MBOAT7Q96N66 472 aa20.07■□□□□ 0.8
SREBF1-211ENST00000476994 RMDN3Q96TC7 470 aa20.07■□□□□ 0.8
SREBF1-211ENST00000476994 TSEN34Q9BSV6 310 aaKnown RBP20.07■□□□□ 0.8
SREBF1-211ENST00000476994 SPC25Q9HBM1 224 aa20.07■□□□□ 0.8
SREBF1-211ENST00000476994 ZHX1Q9UKY1 873 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-211ENST00000476994 ZNF865P0CJ78 1059 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-211ENST00000476994 CIITAP33076 1130 aa20.06■□□□□ 0.8
SREBF1-211ENST00000476994 TRAPPC10P48553 1259 aa20.06■□□□□ 0.8
SREBF1-211ENST00000476994 MAMDC4Q6UXC1 1216 aa20.06■□□□□ 0.8
SREBF1-211ENST00000476994 NEK8Q86SG6 692 aa20.06■□□□□ 0.8
SREBF1-211ENST00000476994 MORC4Q8TE76 937 aa20.06■□□□□ 0.8
SREBF1-211ENST00000476994 NSUN6Q8TEA1 469 aaKnown RBP20.06■□□□□ 0.8
SREBF1-211ENST00000476994 MTMR10Q9NXD2 777 aa20.06■□□□□ 0.8
SREBF1-211ENST00000476994 DDX49Q9Y6V7 483 aaKnown RBP20.06■□□□□ 0.8
SREBF1-211ENST00000476994 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 CLTBP09497 229 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 EIF2AK2P19525 551 aaKnown RBP20.05■□□□□ 0.8
SREBF1-211ENST00000476994 USP11P51784 963 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 MRPS9P82933 396 aaKnown RBP20.05■□□□□ 0.8
SREBF1-211ENST00000476994 TLE2Q04725 743 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 NBR1Q14596 966 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
SREBF1-211ENST00000476994 RILPL1Q5EBL4 403 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 ZNF697Q5TEC3 545 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 PCNX4Q63HM2 1172 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 FAM109BQ6ICB4 259 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-211ENST00000476994 BADQ92934 168 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 TNPO1Q92973 898 aaKnown RBP20.05■□□□□ 0.8
SREBF1-211ENST00000476994 ABHD16BQ9H3Z7 469 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 STARD7Q9NQZ5 370 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 PDLIM7Q9NR12 457 aa20.05■□□□□ 0.8
SREBF1-211ENST00000476994 CYP3A7-CYP3A51PA0A087WV96 503 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 A0A1W2PQ45 241 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-211ENST00000476994 A0A1W2PQY0 241 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 MOXD2PA6NHM9 499 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 NR3C2P08235 984 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 CYP3A7P24462 503 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 MOXD1Q6UVY6 613 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 VSIG10LQ86VR7 867 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 PCSK9Q8NBP7 692 aaKnown RBP20.04■□□□□ 0.8
SREBF1-211ENST00000476994 LENG9Q96B70 501 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 USP28Q96RU2 1077 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 IWS1Q96ST2 819 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 FTOQ9C0B1 505 aaKnown RBP eCLIP20.04■□□□□ 0.8
SREBF1-211ENST00000476994 EHMT1Q9H9B1 1298 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.04■□□□□ 0.8
SREBF1-211ENST00000476994 ADD3Q9UEY8 706 aaKnown RBP20.04■□□□□ 0.8
SREBF1-211ENST00000476994 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
SREBF1-211ENST00000476994 IGLV3-22A0A075B6J6 115 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 FAM86B1E9PN63 330 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 PQBP1O60828 265 aaKnown RBP20.03■□□□□ 0.8
SREBF1-211ENST00000476994 DUSP11O75319 330 aaKnown RBP20.03■□□□□ 0.8
SREBF1-211ENST00000476994 TDP2O95551 362 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 FAM86B2P0C5J1 330 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 RAG1P15918 1043 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 DNM1Q05193 864 aaKnown RBP20.03■□□□□ 0.8
SREBF1-211ENST00000476994 TTC38Q5R3I4 469 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 ARHGEF16Q5VV41 709 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-211ENST00000476994 NOL7Q9UMY1 257 aaKnown RBP20.03■□□□□ 0.8
SREBF1-211ENST00000476994 UBIAD1Q9Y5Z9 338 aa20.03■□□□□ 0.8
SREBF1-211ENST00000476994 MROH7Q68CQ1 1323 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 DLL1O00548 723 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms