RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 FOXP1Q9H334 677 aaPredicted RBP16.41■□□□□ 0.22
CCNL1-217ENST00000476367 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
CCNL1-217ENST00000476367 STX6O43752 255 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 SORBS3O60504 671 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
CCNL1-217ENST00000476367 MNX1P50219 401 aaPredicted RBP16.4■□□□□ 0.22
CCNL1-217ENST00000476367 ARHGAP4P98171 946 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 TRIM29Q14134 588 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 RNF180Q86T96 592 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 OR6J1Q8NGC5 347 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
CCNL1-217ENST00000476367 AP5M1Q9H0R1 490 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 SPC25Q9HBM1 224 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 KIF3AQ9Y496 699 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 ALPK3Q96L96 1907 aa16.4■□□□□ 0.22
CCNL1-217ENST00000476367 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 DNM1LO00429 736 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 STAM2O75886 525 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 CYP3A4P08684 503 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 ITGB5P18084 799 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 TOB1P50616 345 aaPredicted RBP16.39■□□□□ 0.21
CCNL1-217ENST00000476367 BEX3Q00994 111 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 SEMA3FQ13275 785 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 INF2Q27J81 1249 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 MCTP2Q6DN12 878 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 XRRA1Q6P2D8 792 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 PIK3AP1Q6ZUJ8 805 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 LENG9Q96B70 501 aa16.39■□□□□ 0.21
CCNL1-217ENST00000476367 UPF3AQ9H1J1 476 aaKnown RBP16.39■□□□□ 0.21
CCNL1-217ENST00000476367 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
CCNL1-217ENST00000476367 PDCP20941 246 aa16.38■□□□□ 0.21
CCNL1-217ENST00000476367 GJA9P57773 515 aa16.38■□□□□ 0.21
CCNL1-217ENST00000476367 RESTQ13127 1097 aa16.38■□□□□ 0.21
CCNL1-217ENST00000476367 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
CCNL1-217ENST00000476367 NOSTRINQ8IVI9 506 aa16.38■□□□□ 0.21
CCNL1-217ENST00000476367 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
CCNL1-217ENST00000476367 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
CCNL1-217ENST00000476367 NKRFO15226 690 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNL1-217ENST00000476367 FIBPO43427 364 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 UBA1P22314 1058 aaKnown RBP16.37■□□□□ 0.21
CCNL1-217ENST00000476367 ZNF76P36508 570 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 FSCN1Q16658 493 aaKnown RBP16.37■□□□□ 0.21
CCNL1-217ENST00000476367 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 NECAB2Q7Z6G3 386 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 NLRX1Q86UT6 975 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 FERMT2Q96AC1 680 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 PKD2L1Q9P0L9 805 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
CCNL1-217ENST00000476367 UBIAD1Q9Y5Z9 338 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 H3BQV1 296 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 CTAGE5O15320 804 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 GH1P01241 217 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 CAPN2P17655 700 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 CIITAP33076 1130 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 MTMR1Q13613 665 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 NONOQ15233 471 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNL1-217ENST00000476367 FAM173BQ6P4H8 233 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 UBE2Q1Q7Z7E8 422 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 GPRASP2Q96D09 838 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 MBOAT7Q96N66 472 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 IPO9Q96P70 1041 aaKnown RBP16.37■□□□□ 0.21
CCNL1-217ENST00000476367 C11orf49Q9H6J7 331 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 BCAS3Q9H6U6 928 aa16.37■□□□□ 0.21
CCNL1-217ENST00000476367 WDR81Q562E7 1941 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 CYP3A7-CYP3A51PA0A087WV96 503 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 CCDC194A0A1B0GVG4 234 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 TDP2O95551 362 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 BRD1O95696 1058 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 GGPS1O95749 300 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 CYP3A7P24462 503 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 CST5P28325 142 aaPredicted RBP16.36■□□□□ 0.21
CCNL1-217ENST00000476367 SP2Q02086 613 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 ARHGAP1Q07960 439 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 NBR1Q14596 966 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 KCNA10Q16322 511 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 KCNV1Q6PIU1 500 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
CCNL1-217ENST00000476367 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 MXRA8Q9BRK3 442 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 SENP6Q9GZR1 1112 aaPredicted RBP16.36■□□□□ 0.21
CCNL1-217ENST00000476367 Q9Y3F1 56 aa16.36■□□□□ 0.21
CCNL1-217ENST00000476367 SPATA31C2B4DYI2 1134 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 MEIS1O00470 390 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 SLC37A4O43826 429 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 ICAM3P32942 547 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 USP11P51784 963 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCNL1-217ENST00000476367 CEP55Q53EZ4 464 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 MCTP1Q6DN14 999 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 AFG1LQ8WV93 481 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
CCNL1-217ENST00000476367 A0A1W2PQ45 241 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 A0A1W2PQY0 241 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 ASGR1P07306 291 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 ARP10275 920 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms