RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 ICAM3P32942 547 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 BMPR1AP36894 532 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 NDUFV1P49821 464 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 RPS6P62753 249 aaKnown RBP17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 BTNL9Q6UXG8 535 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 FIBCD1Q8N539 461 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 CLEC4DQ8WXI8 215 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 WNT8BQ93098 351 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 MAF1Q9H063 256 aa17.12■□□□□ 0.33
CSNK2B-207ENST00000475875 MYH7P12883 1935 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 EPG5Q9HCE0 2579 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 GRM6O15303 877 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 MMP1P03956 469 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 TDO2P48775 406 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 TFAP4Q01664 338 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 MFSD10Q14728 455 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 SERINC5Q86VE9 423 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 DCAF4Q8WV16 495 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 PHF7Q9BWX1 381 aaPredicted RBP17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 NLRC5Q86WI3 1866 aa17.11■□□□□ 0.33
CSNK2B-207ENST00000475875 CAND2O75155 1236 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 SLC3A2P08195 630 aaKnown RBP17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 KIAA0753Q2KHM9 967 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 APBB2Q92870 758 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 CLP1Q92989 425 aaKnown RBP17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 EPB41L4AQ9HCS5 686 aaPredicted RBP17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
CSNK2B-207ENST00000475875 LINC01565O15544 149 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 KDM4AO75164 1064 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 UPP2O95045 317 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 THPOP40225 353 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 SYDE2Q5VT97 1194 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 EFHBQ8N7U6 833 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 RGS22Q8NE09 1264 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 IGFLR1Q9H665 355 aa17.09■□□□□ 0.33
CSNK2B-207ENST00000475875 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 PTPN21Q16825 1174 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 LY6KQ17RY6 165 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 DHX37Q8IY37 1157 aaKnown RBP17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 PPTC7Q8NI37 304 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 APPBP2Q92624 585 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 NKD2Q969F2 451 aaPredicted RBP17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 RIPOR3Q96MK2 946 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 CLEC1BQ9P126 229 aa17.08■□□□□ 0.32
CSNK2B-207ENST00000475875 ADGRA3Q8IWK6 1321 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 NOVP48745 357 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 LAMC2Q13753 1193 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 P2RX5Q93086 422 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 OSBP2Q969R2 916 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 INCENPQ9NQS7 918 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 USP15Q9Y4E8 981 aaPredicted RBP17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 ATG2AQ2TAZ0 1938 aa17.07■□□□□ 0.32
CSNK2B-207ENST00000475875 ZNF292O60281 2723 aa17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 PATL2C9JE40 543 aaKnown RBP17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 GPAA1O43292 621 aa17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 ZNF200P98182 395 aaPredicted RBP17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 CHST3Q7LGC8 479 aa17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 CHMP4CQ96CF2 233 aa17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 IWS1Q96ST2 819 aa17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 NACAP1Q9BZK3 213 aa17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 RC3H2Q9HBD1 1191 aaKnown RBP17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 DDX41Q9UJV9 622 aaKnown RBP17.06■□□□□ 0.32
CSNK2B-207ENST00000475875 DNAH14Q0VDD8 3507 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 FSD2A1L4K1 749 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 PPFIA4O75335 1185 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 APPP05067 770 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 HOXC8P31273 242 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 SEPT14Q6ZU15 432 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 ADSSL1Q8N142 457 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 WDR87Q6ZQQ6 2873 aa17.05■□□□□ 0.32
CSNK2B-207ENST00000475875 TSPY2A6NKD2 308 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 HMMRO75330 724 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 ZFYP08048 801 aaPredicted RBP17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 ZNF286BP0CG31 522 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 SLC16A2P36021 539 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 CAMK1Q14012 370 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 STXBP2Q15833 593 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 RASGRP2Q7LDG7 609 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 NSUN6Q8TEA1 469 aaKnown RBP17.04■□□□□ 0.32
CSNK2B-207ENST00000475875 SUSD6Q92537 303 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms