RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 ANGPTL2Q9UKU9 493 aa5.82□□□□□ -1.48
USP4-209ENST00000475873 AKAP2Q9Y2D5 859 aa5.82□□□□□ -1.48
USP4-209ENST00000475873 COG6Q9Y2V7 657 aa5.82□□□□□ -1.48
USP4-209ENST00000475873 MRPL42Q9Y6G3 142 aaKnown RBP5.82□□□□□ -1.48
USP4-209ENST00000475873 KRBA1A5PL33 1030 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 F5H6K3 240 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 TAF4O00268 1085 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 ZBED4O75132 1171 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 IDH1O75874 414 aaKnown RBP5.81□□□□□ -1.48
USP4-209ENST00000475873 GLULP15104 373 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 NCLP19338 710 aaKnown RBP5.81□□□□□ -1.48
USP4-209ENST00000475873 CDK8P49336 464 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 SNAP25P60880 206 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 RING1Q06587 406 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 KLRC3Q07444 240 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 PTK7Q13308 1070 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 DUSP6Q16828 381 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 VARS2Q5ST30 1063 aaKnown RBP5.81□□□□□ -1.48
USP4-209ENST00000475873 GORABQ5T7V8 394 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 LRSAM1Q6UWE0 723 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 SIX5Q8N196 739 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 KLHL23Q8NBE8 558 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 AFG1LQ8WV93 481 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 POF1BQ8WVV4 589 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 TMEM121BQ9BXQ6 578 aaPredicted RBP5.81□□□□□ -1.48
USP4-209ENST00000475873 GOPCQ9HD26 462 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 TLR7Q9NYK1 1049 aaKnown RBP5.81□□□□□ -1.48
USP4-209ENST00000475873 LIMD1Q9UGP4 676 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 MYO18BQ8IUG5 2567 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 COL4A3Q01955 1670 aa5.81□□□□□ -1.48
USP4-209ENST00000475873 USP9XQ93008 2570 aaPredicted RBP5.8□□□□□ -1.48
USP4-209ENST00000475873 MYH4Q9Y623 1939 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 DENND4AQ7Z401 1863 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 PRR5-ARHGAP8B1AHC4 643 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 RSPH10B2B2RC85 870 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 HAS3O00219 553 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 SLC30A4O14863 429 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 PRKAB2O43741 272 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 KPNA6O60684 536 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 MMP3P08254 477 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 WEE2P0C1S8 567 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 RSPH10BP0C881 870 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 UBTFL1P0CB47 393 aaPredicted RBP5.8□□□□□ -1.48
USP4-209ENST00000475873 ALDH5A1P51649 535 aaPredicted RBP5.8□□□□□ -1.48
USP4-209ENST00000475873 OAZ1P54368 228 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 ARHGAP8P85298 464 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 LMNB2Q03252 620 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 SLFNL1Q499Z3 407 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 SOWAHCQ53LP3 525 aaPredicted RBP5.8□□□□□ -1.48
USP4-209ENST00000475873 N4BP2L1Q5TBK1 243 aaPredicted RBP5.8□□□□□ -1.48
USP4-209ENST00000475873 ANKRD54Q6NXT1 300 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 KANK3Q6NY19 840 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 CCDC62Q6P9F0 684 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 TMEM184AQ6ZMB5 413 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 RASGRP2Q7LDG7 609 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 LCORLQ8N3X6 602 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 P2RX5Q93086 422 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 TRERF1Q96PN7 1200 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 MEIS3Q99687 375 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 RTP3Q9BQQ7 232 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 PLVAPQ9BX97 442 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 TLE6Q9H808 572 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 KANSL2Q9H9L4 492 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 GPR108Q9NPR9 543 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 IGSF5Q9NSI5 407 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 SWAP70Q9UH65 585 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.8□□□□□ -1.48
USP4-209ENST00000475873 HECTD1Q9ULT8 2610 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 ASXL3Q9C0F0 2248 aa5.8□□□□□ -1.48
USP4-209ENST00000475873 EMSYQ7Z589 1322 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 NARSO43776 548 aaKnown RBP5.79□□□□□ -1.48
USP4-209ENST00000475873 DGKIO75912 1065 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 DCNP07585 359 aaKnown RBP5.79□□□□□ -1.48
USP4-209ENST00000475873 CTSHP09668 335 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 ZNF286BP0CG31 522 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 ALAS1P13196 640 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 SDHBP21912 280 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 EDNRBP24530 442 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 THPOP40225 353 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 TECP42680 631 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 PSEN2P49810 448 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 GATMP50440 423 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 ERVFC1P60507 584 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 ARHGAP1Q07960 439 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 PPP2R5BQ15173 497 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 CCDC184Q52MB2 194 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 TTC39AQ5SRH9 613 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 C16orf86Q6ZW13 317 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 SERINC5Q86VE9 423 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 ZDHHC14Q8IZN3 488 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 LRRC47Q8N1G4 583 aaKnown RBP5.79□□□□□ -1.48
USP4-209ENST00000475873 KDF1Q8NAX2 398 aaPredicted RBP5.79□□□□□ -1.48
USP4-209ENST00000475873 LINC01599Q8WXQ3 324 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 SEPT8Q92599 483 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 ZNF512BQ96KM6 892 aaPredicted RBP5.79□□□□□ -1.48
USP4-209ENST00000475873 CCDC17Q96LX7 622 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 NEK1Q96PY6 1258 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 ALG1Q9BT22 464 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 AAASQ9NRG9 546 aa5.79□□□□□ -1.48
USP4-209ENST00000475873 NCDNQ9UBB6 729 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms