RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 LBHD1Q9BQE6 289 aaPredicted RBP17.27■□□□□ 0.36
SNX13-207ENST00000475800 TSEN34Q9BSV6 310 aaKnown RBP17.27■□□□□ 0.36
SNX13-207ENST00000475800 PHF20Q9BVI0 1012 aa17.27■□□□□ 0.36
SNX13-207ENST00000475800 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
SNX13-207ENST00000475800 PRDM5Q9NQX1 630 aaPredicted RBP17.27■□□□□ 0.36
SNX13-207ENST00000475800 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
SNX13-207ENST00000475800 ADCY6O43306 1168 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 ZEB2O60315 1214 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 JAK2O60674 1132 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 CD2BP2O95400 341 aaKnown RBP17.26■□□□□ 0.35
SNX13-207ENST00000475800 PGK1P00558 417 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 C6orf222P0C671 652 aaPredicted RBP17.26■□□□□ 0.35
SNX13-207ENST00000475800 ICAM3P32942 547 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 MRPS9P82933 396 aaKnown RBP17.26■□□□□ 0.35
SNX13-207ENST00000475800 CCDC62Q6P9F0 684 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 FAM184AQ8NB25 1140 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 GPRASP2Q96D09 838 aa17.26■□□□□ 0.35
SNX13-207ENST00000475800 MOXD2PA6NHM9 499 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 MAFGO15525 162 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
SNX13-207ENST00000475800 FIBPO43427 364 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 RGS20O76081 388 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 GH1P01241 217 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 KLHDC9Q8NEP7 349 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
SNX13-207ENST00000475800 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 PRKAG2Q9UGJ0 569 aa17.25■□□□□ 0.35
SNX13-207ENST00000475800 DDX41Q9UJV9 622 aaKnown RBP17.25■□□□□ 0.35
SNX13-207ENST00000475800 CYP3A4P08684 503 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 CPT1AP50416 773 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 GNASQ5JWF2 1037 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 KRT25Q7Z3Z0 450 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
SNX13-207ENST00000475800 OR6J1Q8NGC5 347 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 FAM161BQ96MY7 647 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 KCNJ14Q9UNX9 436 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.24■□□□□ 0.35
SNX13-207ENST00000475800 UBIAD1Q9Y5Z9 338 aa17.24■□□□□ 0.35
SNX13-207ENST00000475800 SPATA31C2B4DYI2 1134 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 M0R2N6 131 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 ARIH2O95376 493 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 ZNF76P36508 570 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 NEDD9Q14511 834 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 NPY5RQ15761 445 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 FSCN1Q16658 493 aaKnown RBP17.23■□□□□ 0.35
SNX13-207ENST00000475800 NIPA1Q7RTP0 329 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 RASGRP4Q8TDF6 673 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 SNX21Q969T3 373 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 EMID1Q96A84 441 aaPredicted RBP17.23■□□□□ 0.35
SNX13-207ENST00000475800 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 MXRA8Q9BRK3 442 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 JADE2Q9NQC1 790 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 RTEL1Q9NZ71 1219 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 PHF24Q9UPV7 400 aa17.23■□□□□ 0.35
SNX13-207ENST00000475800 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 KPNA6O60684 536 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 CABYRO75952 493 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 MMP1P03956 469 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 KRT2P35908 639 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 USP11P51784 963 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 MTMR1Q13613 665 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 NONOQ15233 471 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX13-207ENST00000475800 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX13-207ENST00000475800 KCNA10Q16322 511 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 LRIT3Q3SXY7 679 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 CEP55Q53EZ4 464 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 SLC39A5Q6ZMH5 540 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
SNX13-207ENST00000475800 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
SNX13-207ENST00000475800 DOCK5Q9H7D0 1870 aa17.21■□□□□ 0.35
SNX13-207ENST00000475800 CTAGE5O15320 804 aa17.21■□□□□ 0.35
SNX13-207ENST00000475800 ITGB5P18084 799 aa17.21■□□□□ 0.35
SNX13-207ENST00000475800 UBA1P22314 1058 aaKnown RBP17.21■□□□□ 0.35
SNX13-207ENST00000475800 CIITAP33076 1130 aa17.21■□□□□ 0.35
SNX13-207ENST00000475800 ACLYP53396 1101 aa17.21■□□□□ 0.35
SNX13-207ENST00000475800 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
SNX13-207ENST00000475800 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
SNX13-207ENST00000475800 KRT40Q6A162 431 aa17.21■□□□□ 0.35
SNX13-207ENST00000475800 CCSAPQ6IQ19 270 aaPredicted RBP17.21■□□□□ 0.35
SNX13-207ENST00000475800 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
SNX13-207ENST00000475800 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.35
SNX13-207ENST00000475800 MYADML2A6NDP7 307 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 A6NJR5 290 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
SNX13-207ENST00000475800 MEIS1O00470 390 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 DTNBO60941 627 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 GGPS1O95749 300 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 ASGR1P07306 291 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 CUL4AQ13619 759 aa17.2■□□□□ 0.34
SNX13-207ENST00000475800 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
SNX13-207ENST00000475800 TMEM63BQ5T3F8 832 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms