RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 MEIS2O14770 477 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 CYP2C9P11712 490 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 CASTP20810 708 aaKnown RBP14.13□□□□□ -0.15
SSR1-205ENST00000475213 SP2Q02086 613 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 PTPN11Q06124 597 aaPredicted RBP14.13□□□□□ -0.15
SSR1-205ENST00000475213 LAMC2Q13753 1193 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 KRT32Q14532 448 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 DGKDQ16760 1214 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 ZNF697Q5TEC3 545 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 PSRC1Q6PGN9 363 aaPredicted RBP14.13□□□□□ -0.15
SSR1-205ENST00000475213 KCNV1Q6PIU1 500 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 APOA5Q6Q788 366 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 USP17L6PQ6QN14 398 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 TMTC3Q6ZXV5 915 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 ZNF365Q70YC5 407 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 DHX37Q8IY37 1157 aaKnown RBP14.13□□□□□ -0.15
SSR1-205ENST00000475213 CCDC82Q8N4S0 544 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 PPTC7Q8NI37 304 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 KAT2BQ92831 832 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 GPKOWQ92917 476 aaPredicted RBP eCLIP14.13□□□□□ -0.15
SSR1-205ENST00000475213 FAM161BQ96MY7 647 aa14.13□□□□□ -0.15
SSR1-205ENST00000475213 MYO9BQ13459 2157 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 hCG_1642624A0A1W2PR95 340 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 PIK3CDO00329 1044 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 SORBS3O60504 671 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 CHMP4BP1P59074 171 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 MRPS9P82933 396 aaKnown RBP14.12□□□□□ -0.15
SSR1-205ENST00000475213 CELF3Q5SZQ8 465 aaKnown RBP14.12□□□□□ -0.15
SSR1-205ENST00000475213 RASIP1Q5U651 963 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 MYSM1Q5VVJ2 828 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 SYNE3Q6ZMZ3 975 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 SMARCC2Q8TAQ2 1214 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 CUL5Q93034 780 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 SCLYQ96I15 445 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 GUCD1Q96NT3 240 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 BRPF3Q9ULD4 1205 aa14.12□□□□□ -0.15
SSR1-205ENST00000475213 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.11□□□□□ -0.15
SSR1-205ENST00000475213 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.11□□□□□ -0.15
SSR1-205ENST00000475213 GGPS1O95749 300 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 NEFLP07196 543 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 TGFB3P10600 412 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 UBA1P22314 1058 aaKnown RBP14.11□□□□□ -0.15
SSR1-205ENST00000475213 SESTD1Q86VW0 696 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 GBF1Q92538 1859 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 KCNB2Q92953 911 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 VWCEQ96DN2 955 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 TANC1Q9C0D5 1861 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 SEMA6BQ9H3T3 888 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 RBM28Q9NW13 759 aaKnown RBP14.11□□□□□ -0.15
SSR1-205ENST00000475213 STXBP5LQ9Y2K9 1186 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 TET1Q8NFU7 2136 aa14.11□□□□□ -0.15
SSR1-205ENST00000475213 ZBTB43O43298 467 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 STAM2O75886 525 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 FGBP02675 491 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 HMGB1P09429 215 aaKnown RBP14.1□□□□□ -0.15
SSR1-205ENST00000475213 ZNF286BP0CG31 522 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 HOXD8P13378 290 aaPredicted RBP14.1□□□□□ -0.15
SSR1-205ENST00000475213 HSPA4P34932 840 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 PSEN2P49810 448 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 PTGISQ16647 500 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 RTN1Q16799 776 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 GDF6Q6KF10 455 aaPredicted RBP14.1□□□□□ -0.15
SSR1-205ENST00000475213 RPUSD2Q8IZ73 545 aaKnown RBP14.1□□□□□ -0.15
SSR1-205ENST00000475213 HERVK_113Q902F9 699 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 SPATA33Q96N06 139 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 INPP4AQ96PE3 977 aaPredicted RBP14.1□□□□□ -0.15
SSR1-205ENST00000475213 TTYH1Q9H313 450 aaPredicted RBP14.1□□□□□ -0.15
SSR1-205ENST00000475213 PSTPIP2Q9H939 334 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 RTEL1Q9NZ71 1219 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 CNTNAP5Q8WYK1 1306 aa14.1□□□□□ -0.15
SSR1-205ENST00000475213 EYSQ5T1H1 3165 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 KLF18A0A0U1RQI7 1052 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 PPFIA4O75335 1185 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 F2P00734 622 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 CHRM1P11229 460 aaPredicted RBP14.09□□□□□ -0.15
SSR1-205ENST00000475213 CPA1P15085 419 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 ICAM3P32942 547 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 SEMA3FQ13275 785 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 MFSD10Q14728 455 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 GNPTABQ3T906 1256 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 PCNX4Q63HM2 1172 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 OTOP2Q7RTS6 562 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 HEATR3Q7Z4Q2 680 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 CTAGE1Q96RT6 745 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 ALG1Q9BT22 464 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 KATNAL1Q9BW62 490 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 BCAS3Q9H6U6 928 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 MLXIPQ9HAP2 919 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 CXXC1Q9P0U4 656 aaPredicted RBP14.09□□□□□ -0.15
SSR1-205ENST00000475213 NOD1Q9Y239 953 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 SNX14Q9Y5W7 946 aa14.09□□□□□ -0.15
SSR1-205ENST00000475213 TMEM265A0A087WTH1 108 aa14.08□□□□□ -0.16
SSR1-205ENST00000475213 GOLGA8AA7E2F4 631 aa14.08□□□□□ -0.16
SSR1-205ENST00000475213 GOLGA8BA8MQT2 603 aa14.08□□□□□ -0.16
SSR1-205ENST00000475213 GRXCR1A8MXD5 290 aa14.08□□□□□ -0.16
SSR1-205ENST00000475213 SPATA31C2B4DYI2 1134 aa14.08□□□□□ -0.16
SSR1-205ENST00000475213 HAS3O00219 553 aa14.08□□□□□ -0.16
SSR1-205ENST00000475213 DNAJB2P25686 324 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms