RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 PAK2Q13177 524 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 ASTE1Q2TB18 679 aaPredicted RBP18.01■□□□□ 0.47
TPR-205ENST00000474852 CCDC40Q4G0X9 1142 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 GALNT17Q6IS24 598 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 SUGP1Q8IWZ8 645 aaKnown RBP18.01■□□□□ 0.47
TPR-205ENST00000474852 IQCKQ8N0W5 287 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 TGFBRAP1Q8WUH2 860 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 TBC1D5Q92609 795 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 PJA2O43164 708 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 SSBP05455 408 aaKnown RBP eCLIP18.01■□□□□ 0.47
TPR-205ENST00000474852 PPP1R2P41236 205 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 HLTFQ14527 1009 aaKnown RBP eCLIP18.01■□□□□ 0.47
TPR-205ENST00000474852 RNF187Q5TA31 235 aaPredicted RBP18.01■□□□□ 0.47
TPR-205ENST00000474852 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 LRRC55Q6ZSA7 311 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 UNC13DQ70J99 1090 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 KCNK18Q7Z418 384 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 MAPKAPK5Q8IW41 473 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 RUBCNQ92622 972 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 PNMA5Q96PV4 448 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 C6orf50Q9HD87 102 aa18.01■□□□□ 0.47
TPR-205ENST00000474852 PALM3A6NDB9 673 aaPredicted RBP18■□□□□ 0.47
TPR-205ENST00000474852 TRAF5O00463 557 aa18■□□□□ 0.47
TPR-205ENST00000474852 RAPGEF1Q13905 1077 aa18■□□□□ 0.47
TPR-205ENST00000474852 SLC9C1Q4G0N8 1177 aa18■□□□□ 0.47
TPR-205ENST00000474852 EP400NLQ6ZTU2 488 aa18■□□□□ 0.47
TPR-205ENST00000474852 PIK3R5Q8WYR1 880 aa18■□□□□ 0.47
TPR-205ENST00000474852 DDX12PQ92771 950 aa18■□□□□ 0.47
TPR-205ENST00000474852 PIGSQ96S52 555 aa18■□□□□ 0.47
TPR-205ENST00000474852 GDF3Q9NR23 364 aa18■□□□□ 0.47
TPR-205ENST00000474852 ADAMTS1Q9UHI8 967 aa18■□□□□ 0.47
TPR-205ENST00000474852 SLC37A4O43826 429 aa18■□□□□ 0.47
TPR-205ENST00000474852 TDP2O95551 362 aa18■□□□□ 0.47
TPR-205ENST00000474852 SEMA3FQ13275 785 aa18■□□□□ 0.47
TPR-205ENST00000474852 CALCRLQ16602 461 aa18■□□□□ 0.47
TPR-205ENST00000474852 CEP85LQ5SZL2 805 aa18■□□□□ 0.47
TPR-205ENST00000474852 NAA35Q5VZE5 725 aa18■□□□□ 0.47
TPR-205ENST00000474852 OR2W6PQ8NHA6 318 aa18■□□□□ 0.47
TPR-205ENST00000474852 IQCDQ96DY2 449 aa18■□□□□ 0.47
TPR-205ENST00000474852 LSM14BQ9BX40 385 aaKnown RBP18■□□□□ 0.47
TPR-205ENST00000474852 LAMB1P07942 1786 aa18■□□□□ 0.47
TPR-205ENST00000474852 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
TPR-205ENST00000474852 KIAA0753Q2KHM9 967 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 FAM83BQ5T0W9 1011 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 NELFCDQ8IXH7 590 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
TPR-205ENST00000474852 GUF1Q8N442 669 aaKnown RBP17.99■□□□□ 0.47
TPR-205ENST00000474852 SNX29Q8TEQ0 813 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 RAD51CO43502 376 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
TPR-205ENST00000474852 B4GALNT4Q76KP1 1039 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 PPANQ9NQ55 473 aaKnown RBP17.99■□□□□ 0.47
TPR-205ENST00000474852 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
TPR-205ENST00000474852 KIAA1551Q9HCM1 1747 aa17.99■□□□□ 0.47
TPR-205ENST00000474852 SCN7AQ01118 1682 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 A0A087X0T9 212 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 FGFR1OPO95684 399 aaKnown RBP17.98■□□□□ 0.47
TPR-205ENST00000474852 FAM228BP0C875 321 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 TNFRSF8P28908 595 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 GNA11P29992 359 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 HDLBPQ00341 1268 aaKnown RBP17.98■□□□□ 0.47
TPR-205ENST00000474852 GLE1Q53GS7 698 aaKnown RBP17.98■□□□□ 0.47
TPR-205ENST00000474852 KDM7AQ6ZMT4 941 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 FAM133AQ8N9E0 248 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 FGFBP2Q9BYJ0 223 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 PLAAQ9Y263 795 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 E7EVH7 732 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 MEFVO15553 781 aaPredicted RBP17.98■□□□□ 0.47
TPR-205ENST00000474852 MMP14P50281 582 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 RNF10Q8N5U6 811 aaKnown RBP17.98■□□□□ 0.47
TPR-205ENST00000474852 TSG101Q99816 390 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 EPN3Q9H201 632 aa17.98■□□□□ 0.47
TPR-205ENST00000474852 PPP1R37O75864 691 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 NOL4O94818 638 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 RPS8P62241 208 aaKnown RBP17.97■□□□□ 0.47
TPR-205ENST00000474852 LRRC63Q05C16 580 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 GRIK5Q16478 980 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 DDX42Q86XP3 938 aaKnown RBP eCLIP17.97■□□□□ 0.47
TPR-205ENST00000474852 ZNF473Q8WTR7 871 aaKnown RBP17.97■□□□□ 0.47
TPR-205ENST00000474852 COA7Q96BR5 231 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 ABCA3Q99758 1704 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 SSU72P8A0A1W2PR75 194 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 FAM170AA1A519 330 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 KCNK3O14649 394 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
TPR-205ENST00000474852 CXorf56Q9H5V9 222 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 RREB1Q92766 1687 aa17.97■□□□□ 0.47
TPR-205ENST00000474852 BACH1O14867 736 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 RASA1P20936 1047 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 IFT88Q13099 833 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 PTGISQ16647 500 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 ATP6V1G3Q96LB4 118 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 CCT8L2Q96SF2 557 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 BCCIPQ9P287 314 aaKnown RBP eCLIP17.96■□□□□ 0.47
TPR-205ENST00000474852 TSKSQ9UJT2 592 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
TPR-205ENST00000474852 FRMPD2Q68DX3 1309 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms