RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 HOXD10P28358 340 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 MCM7P33993 719 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 ZNF76P36508 570 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 NASPP49321 788 aaPredicted RBP11.37□□□□□ -0.59
COL8A1-206ENST00000474648 SEMA3FQ13275 785 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 IRF5Q13568 498 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 SLC39A14Q15043 492 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 STXBP2Q15833 593 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 OLFML2BQ68BL8 750 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 ARMCX2Q7L311 632 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 NIPA1Q7RTP0 329 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
COL8A1-206ENST00000474648 LINC00301Q8NCQ3 95 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 INPP4AQ96PE3 977 aaPredicted RBP11.37□□□□□ -0.59
COL8A1-206ENST00000474648 MTMR9Q96QG7 549 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 NAP1L4Q99733 375 aaKnown RBP11.37□□□□□ -0.59
COL8A1-206ENST00000474648 APBA2Q99767 749 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 KATNBL1Q9H079 304 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 TMEM60Q9H2L4 133 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 JADE2Q9NQC1 790 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 POLR3EQ9NVU0 708 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 DDX25Q9UHL0 483 aaKnown RBP11.37□□□□□ -0.59
COL8A1-206ENST00000474648 RCOR1Q9UKL0 485 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
COL8A1-206ENST00000474648 B4DLN1 442 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 SPATA31C2B4DYI2 1134 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 MSH4O15457 936 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 STAM2O75886 525 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 BAG4O95429 457 aaKnown RBP11.36□□□□□ -0.59
COL8A1-206ENST00000474648 ICAM3P32942 547 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 CEBPZQ03701 1054 aaKnown RBP11.36□□□□□ -0.59
COL8A1-206ENST00000474648 PDE4DQ08499 809 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 PTGDRQ13258 359 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 ORC2Q13416 577 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-206ENST00000474648 IL17AQ16552 155 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 PRR16Q569H4 304 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 TAPT1Q6NXT6 567 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 PLA2G4DQ86XP0 818 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 HAS1Q92839 578 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 KCNMB3Q9NPA1 279 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-206ENST00000474648 CFAP45Q9UL16 551 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 CNPY2Q9Y2B0 182 aa11.36□□□□□ -0.59
COL8A1-206ENST00000474648 SYNGAP1Q96PV0 1343 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 RBM47A0AV96 593 aaKnown RBP11.35□□□□□ -0.59
COL8A1-206ENST00000474648 ATP9AO75110 1047 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
COL8A1-206ENST00000474648 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
COL8A1-206ENST00000474648 CYP2C19P33261 490 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 KRT85P78386 507 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 ATP2C1P98194 919 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-206ENST00000474648 ARHGEF6Q15052 776 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 PRAMEF19Q5SWL8 479 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 EEPD1Q7L9B9 569 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 ETNPPLQ8TBG4 499 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 LEO1Q8WVC0 666 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-206ENST00000474648 TRIB2Q92519 343 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 GJA10Q969M2 543 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 GPRASP2Q96D09 838 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 UIMC1Q96RL1 719 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 PDGFCQ9NRA1 345 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 KCNH7Q9NS40 1196 aa11.35□□□□□ -0.59
COL8A1-206ENST00000474648 MORC2Q9Y6X9 1032 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-206ENST00000474648 STK25O00506 426 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 MAFGO15525 162 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 DHX15O43143 795 aaKnown RBP11.34□□□□□ -0.59
COL8A1-206ENST00000474648 NEMFO60524 1076 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 YEATS4O95619 227 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 BMP15O95972 392 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 ZNF865P0CJ78 1059 aaPredicted RBP11.34□□□□□ -0.59
COL8A1-206ENST00000474648 LBX1P52954 281 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 PRMT2P55345 433 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 SP2Q02086 613 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 ITGB3BPQ13352 177 aaPredicted RBP11.34□□□□□ -0.59
COL8A1-206ENST00000474648 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 TMEM63BQ5T3F8 832 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 CCDC62Q6P9F0 684 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 SEPT14Q6ZU15 432 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 NLRX1Q86UT6 975 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 FBXO16Q8IX29 292 aaPredicted RBP11.34□□□□□ -0.59
COL8A1-206ENST00000474648 SLC5A5Q92911 643 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 MPHOSPH6Q99547 160 aaKnown RBP11.34□□□□□ -0.59
COL8A1-206ENST00000474648 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 BCAS3Q9H6U6 928 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 GDPD2Q9HCC8 539 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 AGO4Q9HCK5 861 aaKnown RBP11.34□□□□□ -0.59
COL8A1-206ENST00000474648 VTA1Q9NP79 307 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 DOCK3Q8IZD9 2030 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 LCTP09848 1927 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 PLXNB2O15031 1838 aa11.34□□□□□ -0.59
COL8A1-206ENST00000474648 ZSWIM8A7E2V4 1837 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 ZNF236Q9UL36 1845 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 TBX3O15119 743 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 SPTLC2O15270 562 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 FIBPO43427 364 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 ADCY3O60266 1144 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms