RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RAD9AQ99638 391 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 UBAC1Q9BSL1 405 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 KIAA1671Q9BY89 1806 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 ZNF200P98182 395 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-209ENST00000474647 IMMTQ16891 758 aaKnown RBP16.29■□□□□ 0.2
CCDC78-209ENST00000474647 WNT8BQ93098 351 aa16.29■□□□□ 0.2
CCDC78-209ENST00000474647 AMNQ9BXJ7 453 aa16.29■□□□□ 0.2
CCDC78-209ENST00000474647 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
CCDC78-209ENST00000474647 ZSWIM5Q9P217 1185 aa16.29■□□□□ 0.2
CCDC78-209ENST00000474647 HCN4Q9Y3Q4 1203 aa16.29■□□□□ 0.2
CCDC78-209ENST00000474647 LINC01553A4QN01 128 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 EFCAB14O75071 495 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 HOXA13P31271 388 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-209ENST00000474647 NT5C2P49902 561 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 HSD17B4P51659 736 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 IFIT1BQ5T764 474 aaKnown RBP16.28■□□□□ 0.2
CCDC78-209ENST00000474647 STAG2Q8N3U4 1231 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 ANKS1AQ92625 1134 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 LRFN3Q9BTN0 628 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 KRT23Q9C075 422 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 LMCD1Q9NZU5 365 aa16.28■□□□□ 0.2
CCDC78-209ENST00000474647 HAS3O00219 553 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 OPLAHO14841 1288 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 LGR5O75473 907 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 GGPS1O95749 300 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 THPOP40225 353 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 ERVK-21P61565 698 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 MBTPS1Q14703 1052 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 TRIM71Q2Q1W2 868 aaKnown RBP16.27■□□□□ 0.2
CCDC78-209ENST00000474647 TMEM31Q5JXX7 168 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCDC78-209ENST00000474647 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 MYOCDQ8IZQ8 938 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 ZFP91Q96JP5 570 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-209ENST00000474647 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
CCDC78-209ENST00000474647 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 FAM86C2PA6NEL3 165 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 AMHP03971 560 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 HIC1Q14526 733 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 PGM5Q15124 567 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 HSDL1Q3SXM5 330 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 CELF3Q5SZQ8 465 aaKnown RBP16.26■□□□□ 0.19
CCDC78-209ENST00000474647 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 TRAF7Q6Q0C0 670 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 FBXO22Q8NEZ5 403 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 IL31RAQ8NI17 732 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 KHSRPQ92945 711 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC78-209ENST00000474647 C17orf80Q9BSJ5 609 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 DSCC1Q9BVC3 393 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 UBE2ZQ9H832 354 aaPredicted RBP16.26■□□□□ 0.19
CCDC78-209ENST00000474647 CNNM2Q9H8M5 875 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
CCDC78-209ENST00000474647 RSPH10B2B2RC85 870 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 KLRF2D3W0D1 207 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 HIP1O00291 1037 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 ZBTB5O15062 677 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
CCDC78-209ENST00000474647 RGS20O76081 388 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 RSPH10BP0C881 870 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 UBA1P22314 1058 aaKnown RBP16.25■□□□□ 0.19
CCDC78-209ENST00000474647 KCNA5P22460 613 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 CCND2P30279 289 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 KCNV1Q6PIU1 500 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 CHD1LQ86WJ1 897 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 DBF4BQ8NFT6 615 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 MLXIPQ9HAP2 919 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 CTNNA3Q9UI47 895 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 INSL6Q9Y581 213 aa16.25■□□□□ 0.19
CCDC78-209ENST00000474647 C17orf102A2RUQ5 167 aa16.24■□□□□ 0.19
CCDC78-209ENST00000474647 PPFIA4O75335 1185 aa16.24■□□□□ 0.19
CCDC78-209ENST00000474647 CTSHP09668 335 aa16.24■□□□□ 0.19
CCDC78-209ENST00000474647 HOXD8P13378 290 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-209ENST00000474647 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
CCDC78-209ENST00000474647 SMC5Q8IY18 1101 aa16.24■□□□□ 0.19
CCDC78-209ENST00000474647 GPKOWQ92917 476 aaPredicted RBP eCLIP16.24■□□□□ 0.19
CCDC78-209ENST00000474647 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-209ENST00000474647 MAD2L2Q9UI95 211 aa16.24■□□□□ 0.19
CCDC78-209ENST00000474647 MYO7AQ13402 2215 aa16.24■□□□□ 0.19
CCDC78-209ENST00000474647 UPP2O95045 317 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 SP2Q02086 613 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 GHRHRQ02643 423 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 STOX1Q6ZVD7 989 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 SERINC5Q86VE9 423 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 C16orf70Q9BSU1 422 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 OSBPL3Q9H4L5 887 aa16.23■□□□□ 0.19
CCDC78-209ENST00000474647 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
CCDC78-209ENST00000474647 TRIOO75962 3097 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 WDFY4Q6ZS81 3184 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 COL4A6Q14031 1691 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 H3BRB1 525 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-209ENST00000474647 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
CCDC78-209ENST00000474647 LGALS2P05162 132 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms